Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00217 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGCGTTAACCCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCTCCCTTCAACGAGACTTGCCTCATCATCGACGACAGGTCCAAATCCAAACTCACTAAACAAGAAGCTCAAAAGAAGATCAAGGCCAATAACGTCGCCGTTTCCAAGGTCCTCAAGTTGTCGAAGCTGGCCTCCGATTACCGCCCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAGAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTTAAGAAGAAGAAGGTGCCGGTGCAGGTGGACTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGCGCTTCTGTTTCTTGGAACGGGGACTTGTTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAGATTGTTGAGAATATGATGGCTGCCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGTTGAGGAGGCGGAGAAAGAGAAGCAGACGATGGAGGAGGAGGAAGAGGGCGAAGACCATAGTGGCGCGAAGGCGGTGAAGAAGAAGAAGAAGGGGAGGATTCATGAAGTTAGATACATGGATAGCGAAGTTGGTGAGGATAATGTTGAAGATGTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTGTTATGGAGGAAGATTTAAAGGATGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGCAGTGTCAAAGAATTGAAAAAATCTGTTAAGAGAAGTGGTAAAAAGGATAAATCTGCGAAAGTGATGAAGGAAAATTCCATCAAGAAGAATCAGAATAGTGAATTATCTGTTGAGGATGGAGATTCAGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAATCATCATGGTTCCTATTCACATGTCAATGAAGGATCAGATAAATTGGATCCGTGTTATGCTTTTAGCGTTGCAAGTTGTAGTTACTGTCTATATTTCTCCGGTTCGTGAATTGGCTGAAAAAGAGTCAGAAAATGGCATCTTCAGATTGCTTTGGAGTGATGTTACTCGGTTTCTTACAACAATACTTATCGGCACAACTGTTGTGAATATTGCGGCAACTGCCTTGGTTACAGATGCTGCAACAGCAATGTTTGGGGAAGCTGGTGTCAGTGCAGCAACAGGAGTGATGACTGTTGCAATTTTGCTTCTCACTGAAATCACTCCTAAAAGTATAGCAGTGCATAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCTTGGTATTGTATCCTGTGGGGAGAGTTGTTACTTATCTTTCAATGGGGATGCTGAAAATGCTCGGCTTAAAAGGAAGAAGTGAGCCTTATGTAACTGAAGAGGAACTAAAATTGATGCTAAGGGGTGCAGAATTAAGCGGGGCAATAGAGGAAGAGGAACAGGATATGATTGAAAATGTATTGGAAATAAAAGACACACATGTGAGAGAGGTTATGACGCCACTTGTTGATGTTGTTGCAATTGATGGAAGTTTAAGCCTTGTAGATTTTCATCATTTGTGGGTCACACATCAGTACTCGAGGGTACCTGTTTTTGAGCAACGTGTTGATAATATAACGGGAATAGCATATGCAATGGATCTGTTGGATTATGTTAAGAAGGGCGATTTGCTAGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCATATTTCGTACCCGATTCAATGTCCGTTTGGAATCTTCTTAGAGAGTTCCGAATCAGGAAGGTTCACATGGCTGTTGTACTTAATGAGTATGGCGGAACTGTGGGGATTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATTCAGAAAAAAACTGGTTACATAGTAATGCGAGCTGAGGGTGTATTTGACGTTGATGCGAACACATCTATTGATCAGCTCTCTGAAGATTTGAACATCAAGATGCCAGAGGGTCATCAATACGAGACAGTGTCAGGCTTTGTATGCGAAACATTTGGATACATCCCAAGGACAGGTGAATCGATCAAAGTGTCTCTTGAACGAGAAGATGAAGATGATGATAATGAGGAGACCAAGTCTGACAACCAGGACTCGAAAGAGAAGAATCAGATTTTTAAACTCGAGATACTAGCTGGAAATGCCAGAAAAGTGAGCGCTGTTCGGTTCGAAAGGATAAATGGTGAGGATGAGATGTTGGAGGCCAAAGAAGTAACTCACTTTGTCCCTAAAATTGTCAAGAGAAAATGGAATAATGATGAGGACTCGGACGATGCAGACTACGATGGAGATGCATTTGCGAAGAGACCGCAGCACGAGATTTCTAGCGAGTATATAGATGATCAGGAAAATTCTGACAGAAATTAA 2787 0.4413 MASAASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYLVVTLKTIPHKSRVNPYKVPLPHSLLSPFNETCLIIDDRSKSKLTKQEAQKKIKANNVAVSKVLKLSKLASDYRPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVPVQVDLTKKNWKEQVDKACSSALLFLGTGTCCVVKVAKVSMESEQIVENMMAAIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAVPEVKLRIEGSKVEEAEKEKQTMEEEEEGEDHSGAKAVKKKKKGRIHEVRYMDSEVGEDNVEDVAGSEDDGGGVVMEEDLKDAGKGSGELANKKRKKGALSELSSVKELKKSVKRSGKKDKSAKVMKENSIKKNQNSELSVEDGDSGKKGKNIKKKLSLLKSEEADLKKKVRAKKIIMVPIHMSMKDQINWIRVMLLALQVVVTVYISPVRELAEKESENGIFRLLWSDVTRFLTTILIGTTVVNIAATALVTDAATAMFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRVVTYLSMGMLKMLGLKGRSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSLSLVDFHHLWVTHQYSRVPVFEQRVDNITGIAYAMDLLDYVKKGDLLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCETFGYIPRTGESIKVSLEREDEDDDNEETKSDNQDSKEKNQIFKLEILAGNARKVSAVRFERINGEDEMLEAKEVTHFVPKIVKRKWNNDEDSDDADYDGDAFAKRPQHEISSEYIDDQENSDRN 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00217 928 PANTHER HEMOLYSIN-RELATED 442 925 - -
Aip07g00217 928 CDD Ribosomal_L1 14 241 IPR028364 -
Aip07g00217 928 Pfam Ribosomal protein L1p/L10e family 34 236 IPR028364 -
Aip07g00217 928 SUPERFAMILY Ribosomal protein L1 12 242 IPR023674 -
Aip07g00217 928 MobiDBLite consensus disorder prediction 887 928 - -
Aip07g00217 928 Pfam Cyclin M transmembrane N-terminal domain 449 604 IPR002550 -
Aip07g00217 928 ProSiteProfiles CNNM transmembrane domain profile. 451 604 IPR002550 -
Aip07g00217 928 ProSiteProfiles CBS domain profile. 623 684 IPR000644 -
Aip07g00217 928 PANTHER BNAC03G73630D PROTEIN 442 925 - -
Aip07g00217 928 CDD CBS_pair_CorC_HlyC_assoc 618 739 IPR044751 -
Aip07g00217 928 MobiDBLite consensus disorder prediction 820 841 - -
Aip07g00217 928 Gene3D - 87 179 IPR016095 -
Aip07g00217 928 MobiDBLite consensus disorder prediction 258 393 - -
Aip07g00217 928 Pfam Transporter associated domain 764 866 IPR005170 -
Aip07g00217 928 Gene3D - 598 753 IPR046342 -
Aip07g00217 928 Gene3D - 760 861 IPR016169 -
Aip07g00217 928 SMART CorC_HlyC_2 763 867 IPR005170 -
Aip07g00217 928 Coils Coil 250 277 - -
Aip07g00217 928 SUPERFAMILY CBS-domain pair 606 745 IPR046342 -
Aip07g00217 928 Pfam CBS domain 687 742 IPR000644 -
Aip07g00217 928 ProSiteProfiles CBS domain profile. 690 748 IPR000644 -
Aip07g00217 928 MobiDBLite consensus disorder prediction 258 281 - -
Aip07g00217 928 MobiDBLite consensus disorder prediction 902 928 - -
Aip07g00217 928 SUPERFAMILY FAD-binding/transporter-associated domain-like 761 870 IPR036318 GO:0050660
Aip07g00217 928 Coils Coil 822 842 - -
Aip07g00217 928 MobiDBLite consensus disorder prediction 318 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00217 Aip-Chr7 1879219 1885940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00217 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 4.01e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00217 - - gmx:100778907 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00217 07 1879219 1885940 Aip07g00217 07 1879219 1885940 ECH