Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00202 ATGTTTTCTGTGAACTCTGCCACCGTTTCTTTTCTCCTCCAACCACTCTTTCTTCATGCTTTCTCGAGCTTCCTCCACCTCTTATTGGTGGTGGTGATTTTGGTGTTGTGGATTTGGAAGAAAGTCAGAGTGGGAGCTTCTGCTACTGGATATGAGTCTAATAAGACTAATTATAATAAAAAGGCTCTGTTTTGTTCTGTTTTTGCTTCAGCATTTAACCTTATCCTATGTCTCTTTAATTACTTCTATTGGTATAGAAGTGGTTGGTCAGAAGAAGAGCTCGTGACTCTTTTGGATTTGGCACTCAAAGCTCTTGCTTGGGGTGTTGTTGGTGTTTGCTTACAAAAAGGTTTCTTCTTCTTCTTCAGTTCCGGTGATAGTAGGTTTCCATTACTCTTTAGAACTTGGTGTGTCTTCTACCTGCTTGTTTTTTGTTATTGTTTTGTAGTAGACATTGTTCTTGTGTATGAAAAGCATGAGGCTTTACCTGCTCAGTACTTGGTTTCTGATGTAGTTTCAGCTTGTGTGGGTTTATTCTTCTGTTACTTTGTGTGTTTTGTGAGGAGTGAGTGTGAATTTAGCACTCTTGAGGAGACTCTATTGAATGGTGATGCCCATGTTAGTGATAATAAGAAAGGGGCTGAAACTGTTACCCCTTATTCAAATGCTGGAATTTTCAGCATTCTTACATTCTCTTGGGTTGGTCCTCTTATTGCTGTTGGCAATAAGAAGACCTTGGACCTTGAGGATGTGCCACAACTAGATAGCAGCGATAGTGTGGTTCGAGCCTTTCCGAAATTCAGAGAAAAGGTGGAGGCAGATTGTGGTGCAGTTAACAATTTGACCACAATTAAGTTGGTGAAGTTGTTGATAATCTCGGAGTGGAAGGAGATTCTCTTCACAGCAGTTCTTGCATTGCTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTCATTGATGCTTTTGTTCAATACCTTGATGGACAAAGGCTATATGAGAATCAGGGCTATGTTTTGGTTTCTACATTTTTCTTGGCGAAGCTTGTTGAGTGTTTGACTCAGAGGCATTGGTTCTTTAGGTTGCAGCAAATTGGACTTCGAATGCGAGCACTACTTGTGACCATGATCTATAATAAATCATTGACACTTTCATGTCAATCAAAGCAAGGCCATACTTCCGGGGAAGTAATCAACTTCATGTCAGTTGATGCTGATAGGATTGGTGTCTTCAGTTGGTACATTCATGATTTGTGGATGGTAGCTCTGCAAATTTCTTTAGCCTTGTTGATTTTGTATAAAAGCCTTGGCCTTGCTTCAATTGCTGCATTTGTTGCAACCATTGTTGTAATGTTGGCAAATGTCCCCTTGGGATCATTGCAAGAAAAATATCAGGATAAGTTGATGGATTCAAAAGATATAAGAATGAAGGCAACATCAGAGATTCTCAGGAACATGAGGATTCTCAAACTTCAAGGGTGGGAAATGAAGTTTCTGGCTAAGATAACTGAACTCAGGAAAACCGAGCAGGGCTGGTTAAAGAAATTTGTTTATACATCAGCCATGACCACATTTGTGTTTTGGGGTGCTCCAACATTTGTATCTGTGGCTACTTTTGGAACTTGTATGCTTATGGGGATTCCACTTGAATCAGGGAAGATCTTGTCTGCACTTGCTACATTCCGGATTCTTCAAGAGCCTATATATAATCTTCCAGATACAATTTCAATGATAGCACAAACTAAGGTTTCTGTTGATAGGATCTCATCATTCCTTCGTCTTGACGACTTGCAGTCCGATGTTGTAGAGAGGCTTCCTCGCGGTTCTTCTGATAAAGCAATTGAAGTGGTAGATGGAAATTTCTCTTGGGATTTATCTTCACCAAATGCAACATTGAAGAACATAAATCTCACAGTTCTACATGGCATGAGGGTTGCTGTTTGTGGTACTGTAGGATCAGGCAAGTCTACATTACTTTCCTGTATATTAGGAGAAGTGCCAAAGAAATCAGGTATCTTGAAGGTGTGTGGAACAAAGGCCTATGTTGCTCAATCGCCATGGATACAAAGCGGAAAGATAGAGGATAATATATTGTTTGGACAGGAGATGGATAGGGAAAGGTATGAGAAGGTACTTGAATCTTGTTCCTTGAAGAAGGATCTAGAAGTTTTGTCCTTTGGTGATCAGACAGTTATAGGAGAACGCGGTATCAATTTGAGTGGAGGACAGAAACAAAGAATACAAATTGCTCGTGCCCTTTACCAAGATGCTGATATATATTTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGTTTGTTAGGCCATTTGAGTTCAAAGACAGTAGTTTATGTTACTCATCAAGTAGAGTTCTTGCCAGCTGCTGATCTCATCTTGGTCATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATAATGACTTGCTTAATAGTGGGACTGATTTCATGGAACTTGTTGGTGCACACAAGAAAGCGTTGTCTACACTCGAGTCTTTGGATGGAGGAACAACATCAGATGAAATAAGAACCATGGAAGATGGAAGTGTTTCTAGTGCTAATGGAAGTATTAAAGAAAAAGAGGCAAACGGATATGAGCAAAATGGTAAAACAGATGAGAAAGATGAGCCAAAAGGCCAGCTTGTTCAGGAAGAAGAAAGGGAGAAAGGTAGAGTTGGATTTTCAATCTATTGGAGATACATCACGACAGCGTATGGAGGAGCTCTCGTTCCTTTCATATTGTTGTCTCAGATTCTCTTCCAAGTTCTCCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAGTCTCACAAGATGTGGAGCCACCTGTTGAAGGAACAACTCTTTTGGCTGTCTATGTTGCTTTGGCCATTGGAAGTGCATTTTGCATCCTTTCTAGAGCCATGTTTCTTGCCACGGCTGGTTATAAGACAGCTACTATACTTTTCAATAAAATGCATTTCTGCATCTTCCGTTCCCCAATGTCATTCTTTGATTCCACTCCGAGTGGTCGAATCCTTAACAGAGCTTCCACTGACCAAAGTGCAGTAGATACTGATATTCCTTATCAAATTGGTTCGTTCGCCTTCTCCATGATCCAGCTTGTAGGAATTATAGCAGTGATGTCCCAAGTTGCATGGCAAGTTTTCATTGTCTTTATACCTATGATAGCAGCCAGCATATGGTATCAGCAATACTATATACCATCGGCTCGAGAACTATCACGTTTGGTTGGAGTATGCAAAGCTCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACATCAACCATTAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAACAAATATGAAATTGACCGACGGCTATTCTCGGCCAAAGTTTAATATTGCTGGTGCTATGGAGTGGTTGTGCTTCCGATTAGATATGTTGTCATCTATCACATTTGCCTTTTCCTTGATATTCTTGATATCTATTCCTCAAGGAGTCATAGATCCAGGCATTGCCGGTTTAGCTGTTACATATGGTCTTAATTTAAACATGATACAAGCTTGGGTGATATGGAATCTTTGTAACTTGGAGAACAAGATTATATCAGTAGAAAGAATACTTCAGTACACTTCCATTCCTAGTGAGCCTCCCCTTGTTATCGAAGAAAATCGACCAGCTCCTTCTTGGCCATCATATGGAGAGGTTGATATACATAACTTGCAGGTTCGTTATGCTCCGCACCTTCCATTTGTGTTGCGTGGCCTCACATGCACATTTCGCGGAGGACTGAAAACTGGGATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTTATACAAACACTCTTCCGAATTGTTGAACCAACCACAGGAGAAGTTATGATTGACGGCATCAACATCTCTTCAATAGGACTTCATGATTTGAGGTCTAGACTAAGCATTATTCCTCAAGACCCAACCATGTTTGAAGGGACAGTCAGAAATAACCTTGATCCTCTAGAAGAGTACACAGATGAACAAATATGGGAGGCCCTGGACAAGTGTCAGCTTGGTGATGAAGTTAGACAAAAAGAAGGAAAGTTGGACTCGCCAGGTTAG 4122 0.4056 MFSVNSATVSFLLQPLFLHAFSSFLHLLLVVVILVLWIWKKVRVGASATGYESNKTNYNKKALFCSVFASAFNLILCLFNYFYWYRSGWSEEELVTLLDLALKALAWGVVGVCLQKGFFFFFSSGDSRFPLLFRTWCVFYLLVFCYCFVVDIVLVYEKHEALPAQYLVSDVVSACVGLFFCYFVCFVRSECEFSTLEETLLNGDAHVSDNKKGAETVTPYSNAGIFSILTFSWVGPLIAVGNKKTLDLEDVPQLDSSDSVVRAFPKFREKVEADCGAVNNLTTIKLVKLLIISEWKEILFTAVLALLNTLASYVGPYLIDAFVQYLDGQRLYENQGYVLVSTFFLAKLVECLTQRHWFFRLQQIGLRMRALLVTMIYNKSLTLSCQSKQGHTSGEVINFMSVDADRIGVFSWYIHDLWMVALQISLALLILYKSLGLASIAAFVATIVVMLANVPLGSLQEKYQDKLMDSKDIRMKATSEILRNMRILKLQGWEMKFLAKITELRKTEQGWLKKFVYTSAMTTFVFWGAPTFVSVATFGTCMLMGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSVDRISSFLRLDDLQSDVVERLPRGSSDKAIEVVDGNFSWDLSSPNATLKNINLTVLHGMRVAVCGTVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSGKIEDNILFGQEMDRERYEKVLESCSLKKDLEVLSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGHLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYNDLLNSGTDFMELVGAHKKALSTLESLDGGTTSDEIRTMEDGSVSSANGSIKEKEANGYEQNGKTDEKDEPKGQLVQEEEREKGRVGFSIYWRYITTAYGGALVPFILLSQILFQVLQIGSNYWMAWATPVSQDVEPPVEGTTLLAVYVALAIGSAFCILSRAMFLATAGYKTATILFNKMHFCIFRSPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSMIQLVGIIAVMSQVAWQVFIVFIPMIAASIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQETNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPQGVIDPGIAGLAVTYGLNLNMIQAWVIWNLCNLENKIISVERILQYTSIPSEPPLVIEENRPAPSWPSYGEVDIHNLQVRYAPHLPFVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRIVEPTTGEVMIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRQKEGKLDSPG 1373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00202 1373 Gene3D - 1226 1373 IPR027417 -
Aip07g00202 1373 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 299 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00202 1373 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Aip07g00202 1373 CDD ABC_6TM_ABCC_D1 300 587 IPR044746 GO:0140359
Aip07g00202 1373 SUPERFAMILY ABC transporter transmembrane region 292 592 IPR036640 GO:0005524|GO:0016021
Aip07g00202 1373 SUPERFAMILY ABC transporter transmembrane region 923 1225 IPR036640 GO:0005524|GO:0016021
Aip07g00202 1373 MobiDBLite consensus disorder prediction 851 872 - -
Aip07g00202 1373 Gene3D ABC transporter type 1, transmembrane domain 886 1224 IPR036640 GO:0005524|GO:0016021
Aip07g00202 1373 Gene3D ABC transporter type 1, transmembrane domain 278 593 IPR036640 GO:0005524|GO:0016021
Aip07g00202 1373 Pfam ABC transporter transmembrane region 926 1169 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00202 1373 Pfam ABC transporter transmembrane region 300 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00202 1373 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 86 1372 - -
Aip07g00202 1373 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 86 1372 - -
Aip07g00202 1373 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 836 IPR003439 GO:0005524
Aip07g00202 1373 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 926 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00202 1373 MobiDBLite consensus disorder prediction 877 900 - -
Aip07g00202 1373 Gene3D - 594 863 IPR027417 -
Aip07g00202 1373 CDD ABCC_MRP_domain1 613 813 - -
Aip07g00202 1373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 835 IPR027417 -
Aip07g00202 1373 Pfam ABC transporter 1261 1360 IPR003439 GO:0005524
Aip07g00202 1373 MobiDBLite consensus disorder prediction 851 900 - -
Aip07g00202 1373 CDD ABC_6TM_ABCC_D2 924 1218 IPR044726 GO:0140359
Aip07g00202 1373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1233 1370 IPR027417 -
Aip07g00202 1373 Pfam ABC transporter 631 765 IPR003439 GO:0005524
Aip07g00202 1373 SMART AAA_5 640 813 IPR003593 -
Aip07g00202 1373 SMART AAA_5 1269 1354 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00202 Aip-Chr7 1675000 1681074 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00202 613 843 Calmodulin-binding Proteins AT2G36910 29.880 3.54e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00202 - K05666 gmx:100777836 2240.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00202 07 1675000 1681074 Aip07g00202 07 1675000 1681074 ECH