Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00201 ATGGTTTTGGTGACATTGCTTTGTAAGAGAATCATCACAGTAGAATCCAAAGATAAGAAAACTAATAATAATAATAAAGCTTTGTTTCAAAAGACTCTGTTTTGTTCTGTTGGTTTTTCAGCTTTCAACCTTTTCCTCTCTCTCATCGACTACTTCATTTGGTATAGAACTAGTTTGTCACAAGAAAAGCTTTTTACCCTTTTGGATTTGGCTCTCAAAACCGTTTCTTGGGGTGTTCTTGCTATTTCCATGCATAATGATCATATAAGATTTCCCTTACTACTATTCAGAATTTGGTGTGCCTTCTACCTGTTTGTTTCTTGTTCTTCCTTTATAGTGGACATCATTGTTCTTATTCTATACAAAAAACATGTTCCTTTACCACCTCAGTGCATAGTTTCTGATGTGGTAGCTACTCTTGTTGGCTTGTTTTTCTGTTATGTTATGTGTTATGTGAAGAATGATGAGTGTGAAGATATCAGCACCATTGAGGAACCTCTATTGAATGGTGATGATCATGCTTCTTCCATGGAGAAAAAAGAGACTAATAGAGGGGGAGAAACCGTTACGCCTTATTTGAATGCTGGAATTTTCAGCATTCTAACATTCTCTTGGATTGGTTCTCTTATAGCTCTTGGTAATAAGAAAATCTTAGACCTTGAGGATGTTCCACAACTAGATTCCGGAGACAGTGTTGTTGAAGCTTTTCCAGCTTTCAAGGAAAAGGTTGAAGCAGATTGTGGTGGAACAAACCACATAACCACTCTTAAGCTTGTGAAATTGTTAGTAGTTTCAGCATGGAAAGAGATTCTGTTCACTGCATTTCTTGCATTGTTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAGTTTCTTGATGGAAAACAACTCTATGAAAATCAGGGCTATGTTTTGGTTTCTGCATTTTTTGTAGCAAAGATTGTTGAATGTCTTTCACAAAGGCATTGGTTCTTTAAGTTGCAGCAAATCGGAATCCGAATCAGAGCACTGCTTGTGACAATGATCTATAACAAATCATTGACCCTTTCTTGTCAATCAAAAAAGGGACATACTTCAGGGGAGACAATCAACTTGATGACGGTTGATGCCGAAAGAATCGGTGTTTTCAGTTGGTACATGCATGATTTATGGCTAGTAGTATTGCAAGTTTCATTAGCATTGTTGATTTTGTATAAGAATCTTGGCATTGCTTCAATTGCTGCATTTTTTGCAACAGTTTTTGTAATGTTGGCAAATGTTCCTTTAGGATCATTGCAAGAGAAGTTCCAAACAAAGTTGATGGAATCAAAAGATGCAAGAATGAAGGCAACATCAGAGGTTCTTAGGAACATGAGGATCCTCAAATTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAATTCAACTCAGAAAAACTGAACAAATGTGGCTAAAAAAATTTGTTTACACTTCAGCCATGACCACATTTGTGTTTTGGGGTGCTCCAACATTTGTTTCTGTTGTTACTTTTGGCACCTGCATGCTTGTAGGGATTCCACTTGAATCAGGGAAAATCTTATCAGCACTTGCTACATTCAGAATTCTTCAAGAGCCTATATACAATCTTCCAGAAACAATTTCAATGATTGCACAAACTAAGGTTTCTCTTGATAGGATTTCGTCGTTCCTTCGCCTCGAAGACTTGCAATTCGATGTTGTAGAGAAGCTTCCATTAGGTACTTCTGATAAAGCTATTGAAGTAACTAATGGAAACTTCTCTTGGGATTTATCTTCTTCAATTACAACATTGAAGAACATAAATCTAAGTGTTTTTCATGGCATGAAAGTTGCTGTTTGTGGCACTGTTGGATCAGGAAAATCTACATTACTCTCTTGTATATTAGGAGAAGTACCAAAGGTTTCAGGAACTCTAAAAGTGTGTGGTAAGAAAGCATATGTTGCTCAATCACCATGGATACAAAGTGGGAAAATTGAAGATAATATATTGTTTGGTAAGAAGATGGATAGGGAAAAGTATGAGAAGGTTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGACTTTGTCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATTTGAGTGGTGGACAAAAACAAAGGATTCAAATAGCACGTGCTTTATATCAAGATTCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGTTCTCATCTCTTTAAGGAATGTTTGTTAGGCCATTTGAGTTCAAAGACAGTAGTTTATGTTACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTCATGAAAAATGGAAAAATTACTCAATGTGGAAAGTATATTGAATTGCTTAACAATGGAGCTGATTTTATGGAACTTGTTGGTGCACATAAAAAGGCTTTGTCCACACTTGATTCAACAAGTACCTTTGAACAAGATATTAGTGTCTCTAATGCTCATGTTGTGGAACAAAAAGAGGCAAGAAAAGATGATCAAATTGGTAATAAAATAGACATCAATGATCATAGTGAGCTAAAAGGCCAGCTAGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTTGATATATTGGAAATACATCACCACAGCATATAGAGGGATTCTTGTTCCATTCATATTGTTGGCTCAGATTCTGTTCCAAACTCTCCAAATTGGAAGCAACTATTGGATGACTTGGGCTACACCAATCTCACAAGATGTGGATCCATCACCTGTTGAAGGATCAACTCTTATACTTGTTTATGTTGCTTTGGCTATTGGAAGTTCTTTCTGCATTCTTGCTAGAGCTATGCTTCTTGTTACTGCCGGTTACAAAACTGCTACACTGTTATTCAATAAGATGCACTTCTGCATTTTCCGCGCACCAATGTCATTCTTTGATTCTACTCCAAGTGGTAGAATTCTCAATAGAGCTTCTACTGACCAAAGTGCTGTTGATACTGACATTCCAAATCAAATTAGTTCAGTTGCCTTCACTCTCATACAGCTTCTTGGAATCATAGCAGTGATGTCTCAAGTTGCATGGCAAGTTTTCTTTGTATTCATACCTGTCATTGCAGCCAGCATATGGTACCAGCAATATTACTTACCAGCAGCGCGAGAACTATCGCGCTTAGTTGGAGTATGCAAAGCGCCAGTGATTCAACACTTTGCTGAAACAATCTCTGGTGCATCAACCATTAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAACAAATATGAAACTTTCGGACGAATATTCTCGGCCGAAATTCAATGTTACTGGTGCTATGGAATGGTTGTGCTTTCGCTTAGATATGTTGTCTTCAGTCACATTTGCAGTTTCCTTGATATTCTTGGTATCTATTCCAAAAGGAGTCATAAATCCAAGCATTGCTGGTTTAGCTGTTACCTATGGACTAAATTTAAACATGGTGCAAGCTTGGGTTGTATGGAATCTTTGCCGCTTAGAGAACAAGATCATATCGGTCGAAAGGATTATGCAGTATACTTGTGTTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAAATAGACCAGATCCTTCTTGGCCATTATATGGTGAAGTTGACATACAAAACTTGCAGGTTCGTTATGCTTCACACCTTCCACTTGTGTTGCGCGGAATCTCATGCACATTTTATGGAGGATTGAAAACTGGCATTGTTGGAAGAACAGGAAGTGGTAAATCAACTCTCATACAAACTCTATTCCGAATCGTTGAACCAGCTGCTGGGAGAGTTATGATTGATGGCATCAACATATCTTCAGTAGGACTTCATGATTTGAGGTCTAGACTTGGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTTAGAAACAATTTGGACCCTCTTGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTAGATAAGTGCCAACTTGGAGATGAAGTTAGAAAGAAAGATGGAAAGTTGGACTCTCCAGTTAGCGAAAATGGCGAAAATTGGAGCATGGGACAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTGCTAAAGAAGAGCAAGATATTGGTTCTTGATGAAGCAACTGCATCAGTTGATACTGCTACAGACAATTTGATTCAACAAACTCTTAAGCTGCATTTTGCTGACTCTACAATCATAACCATTGCACATAGAATCACTTCTGTTCTTGACAGCAATATGGTCTTGCTTCTTCATCAAGGAGTTATTGAAGAGTATGAGTCACCTTCAAAATTGCTAGAGGATAGGTGTTCTTCTTTTTCCCAACTTGTGGCTGAATATTCCACTAGGTCCAAGTCAACTTTTGATAAATCTGTTGTTCAATGA 4383 0.3776 MVLVTLLCKRIITVESKDKKTNNNNKALFQKTLFCSVGFSAFNLFLSLIDYFIWYRTSLSQEKLFTLLDLALKTVSWGVLAISMHNDHIRFPLLLFRIWCAFYLFVSCSSFIVDIIVLILYKKHVPLPPQCIVSDVVATLVGLFFCYVMCYVKNDECEDISTIEEPLLNGDDHASSMEKKETNRGGETVTPYLNAGIFSILTFSWIGSLIALGNKKILDLEDVPQLDSGDSVVEAFPAFKEKVEADCGGTNHITTLKLVKLLVVSAWKEILFTAFLALLNTLASYVGPYLIDAFVQFLDGKQLYENQGYVLVSAFFVAKIVECLSQRHWFFKLQQIGIRIRALLVTMIYNKSLTLSCQSKKGHTSGETINLMTVDAERIGVFSWYMHDLWLVVLQVSLALLILYKNLGIASIAAFFATVFVMLANVPLGSLQEKFQTKLMESKDARMKATSEVLRNMRILKLQGWEMKFLSKIIQLRKTEQMWLKKFVYTSAMTTFVFWGAPTFVSVVTFGTCMLVGIPLESGKILSALATFRILQEPIYNLPETISMIAQTKVSLDRISSFLRLEDLQFDVVEKLPLGTSDKAIEVTNGNFSWDLSSSITTLKNINLSVFHGMKVAVCGTVGSGKSTLLSCILGEVPKVSGTLKVCGKKAYVAQSPWIQSGKIEDNILFGKKMDREKYEKVLEACSLKKDLETLSFGDQTIIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFKECLLGHLSSKTVVYVTHQVEFLPAADLILVMKNGKITQCGKYIELLNNGADFMELVGAHKKALSTLDSTSTFEQDISVSNAHVVEQKEARKDDQIGNKIDINDHSELKGQLVQEEEREKGKVGFLIYWKYITTAYRGILVPFILLAQILFQTLQIGSNYWMTWATPISQDVDPSPVEGSTLILVYVALAIGSSFCILARAMLLVTAGYKTATLLFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPNQISSVAFTLIQLLGIIAVMSQVAWQVFFVFIPVIAASIWYQQYYLPAARELSRLVGVCKAPVIQHFAETISGASTIRSFDQQSRFQETNMKLSDEYSRPKFNVTGAMEWLCFRLDMLSSVTFAVSLIFLVSIPKGVINPSIAGLAVTYGLNLNMVQAWVVWNLCRLENKIISVERIMQYTCVPSEPPLVVEENRPDPSWPLYGEVDIQNLQVRYASHLPLVLRGISCTFYGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGRVMIDGINISSVGLHDLRSRLGIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKDGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLKLHFADSTIITIAHRITSVLDSNMVLLLHQGVIEEYESPSKLLEDRCSSFSQLVAEYSTRSKSTFDKSVVQ 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00201 1460 CDD ABC_6TM_ABCC_D2 890 1185 IPR044726 GO:0140359
Aip07g00201 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 585 808 IPR003439 GO:0005524
Aip07g00201 1460 Gene3D - 1193 1446 IPR027417 -
Aip07g00201 1460 SUPERFAMILY ABC transporter transmembrane region 265 567 IPR036640 GO:0005524|GO:0016021
Aip07g00201 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 580 807 IPR027417 -
Aip07g00201 1460 CDD ABC_6TM_ABCC_D1 272 559 IPR044746 GO:0140359
Aip07g00201 1460 SMART AAA_5 1236 1428 IPR003593 -
Aip07g00201 1460 SMART AAA_5 612 785 IPR003593 -
Aip07g00201 1460 SUPERFAMILY ABC transporter transmembrane region 889 1192 IPR036640 GO:0005524|GO:0016021
Aip07g00201 1460 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 68 1456 - -
Aip07g00201 1460 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 68 1456 - -
Aip07g00201 1460 Gene3D ABC transporter type 1, transmembrane domain 853 1191 IPR036640 GO:0005524|GO:0016021
Aip07g00201 1460 Gene3D ABC transporter type 1, transmembrane domain 251 567 IPR036640 GO:0005524|GO:0016021
Aip07g00201 1460 Pfam ABC transporter 1227 1375 IPR003439 GO:0005524
Aip07g00201 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 892 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00201 1460 CDD ABCC_MRP_domain2 1208 1428 - -
Aip07g00201 1460 ProSitePatterns ABC transporters family signature. 710 724 IPR017871 GO:0005524
Aip07g00201 1460 Pfam ABC transporter transmembrane region 894 1135 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00201 1460 Pfam ABC transporter transmembrane region 271 538 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00201 1460 Pfam ABC transporter 603 737 IPR003439 GO:0005524
Aip07g00201 1460 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 271 551 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00201 1460 Gene3D - 572 829 IPR027417 -
Aip07g00201 1460 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1210 1444 IPR003439 GO:0005524
Aip07g00201 1460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1436 IPR027417 -
Aip07g00201 1460 CDD ABCC_MRP_domain1 585 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00201 Aip-Chr7 1659867 1665485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00201 585 821 Calmodulin-binding Proteins AT2G36910 30.739 2.30e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00201 - K05666 gmx:100811245 2273.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00201 07 1659867 1665485 Aip07g00201 07 1659867 1665485 ECH