Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00200 ATGTCTCAAATTTCCTCGTACCTTTCCCTTACTTACTCTGACATGAGCTTTCTACTCCAACCCATTTTCCTCCATGCATTCTCTGCCATCATCCACCTCATACTGGTGGCTATGGTTTTGGTGTCTTGGCTTTGGAAGAAGATCACAGTTGGAGAAGCTAGTGATGAGTCCAACAAGCATAAGAAGCTCAAGAATAAAGTTATGTTAAGAAAGACTTTGTTTTGTTCTTTGGGTGTTTCTGCTTTCAACTTTGTCCTCTGCCTCTATAGTTCTTACTTCTTAGAGGAAGAAGGAAAGCTTGTTACCCTTTTGGATTTAGCTATCAAAACTCTTGCTTGGGGTCTTATCAGTGTTTGCATGCACAAGAGGTTCTTCTTCTTCTTGATCAAACCTTGGTGTGTTCTCTATTTCTTTCTTTCATGTTACTCCTTTGTAGTTGATATTATTGTTCTTTTGTATGAAAAGAACGTGGCTTTACCAGCTCAGTACTTAGTTTCTGATGTTGTATCAGCTTCTGTGGGTTTATTCTTTTGTTATGTGGTGTGTTTTGTGAAGAATATTAATGAGTGTGAAGAGGATCATGTCAGTGATGATCTTCAAGATCCATTACTATTGAATAATGGTAATGCACCTGTTTGTGTTACCCCTTTCTCAAGTGCTGGCATTTTCAGCATTCTTACATTCTCTTGGGTGGGCCCTCTTATTGCTCTTGGCAATAAGAAGACCTTGGACCCTGAGGATGTTCCTCAACTTGATAAAAATGATAGTGTTTTTGGAGCTTTTCCAACTTTTAGAGAAAAAATTGAGAAAGATTGTAGTGCTGAAATCAATCACATAACCACTCTTAAGCTGGTGAAGTTGTTGGTACTCTCAGCATGGAGAGAGATTCTCTTCACTGCAGTTCTTGCATTGTTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGCTGGACAAAGGGTCAATGAAAAGCAGGGCTATGCTCTGGTTTCTGCATTTTTCTTGTCAAAACTTGTTGAGTCCCTTTCACAAAGGCATTGGTTGTTTAGGTTGCAGCAAGTTGGGATTAGAATCCAAGCACTGCTTGTAACTCTGATCTATAACAAAGCATTGGTCCTTTCTTGTCAATCAAGGAAGGGTCATACTTCTGGTGAAATGATCAATTTCGTGGCAGTTGATGCCGGAAGAATTGGCAACTTCACTTGGTATATGCATGATTTGTGGAGAGTAGCTCTGCAAGTTGCCTTAGCCTTGTTGCTTTTGTATAAAAATGTCGGTCTTGCTTCAATCGCCGCGTTTGTGGCAACCATAATTGTAATGTTGGTAAATGTTCCTCTTGGAAAATTACAAAAGAAGTTTCAGAAGAACTTCATGGACTCAAAAGATACAAGGATGAAGGCAACATCTGAGATTCTAAGGAACATGAAGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAACTGAGCTTAGGAAAACTGAGGAAGGGTGGTTAAAGAAATCTGCATACAATTCAGCTATCAGTGCTTTTGTGTTCTGGATTGCTCCTACTTTTGTATCTGTTGTTACTTTTGGTTCATGTATGCTTATGGGGATTCCACTTGAATCAGGGAAAATTTTGTCTGCACTTGCAACATTCAGAATCCTTCAAGTTCCCATATATAATCTTCCAAATACAATTTCAGCTATACTACAAACTAAGGTTTCTCTTGATAGGATTTCGTCGTTCCTTCGTCTCGAAGACTTGCAATCTGATGTTGTAGAGAAGCTACCTTTCGGTACTTCAGATAAAGCAATTGAAGTAACCAATGGAAGCTTCTCTTGGGATCTATCTTCTCCAAATACAACATTGAAGAACATAAATCTTGAAGTTTTTCATGGTATGAGGGTTGCTGTTTGTGGGACAGTTGGATCAGGAAAATCTACATTGCTTTCTTGTATATTGGGAGAAGTACCAAAGGTTTCAGGCACTCTAAAAGTGTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGAAAGATAGAGGATAATATACTGTTTGGTAAAGAGATGGATAGGGAAAGGTATGAGAAGGTTCTTGAAGCCTGTTCCTTGAAAAAGGATCTTGAAATTTTGCCATTTGGTGACCAAACAATTATTGGGGAACGTGGGATAAATTTGAGTGGTGGACAAAAACAAAGGGTACAAATTGCTAGATCTCTTTATCAAGATGCTGATATATACATGTTTGATGATCCTTTCAGTGCTGTGGATGCTCATACAGGATCACACATCTTTAAGGAATGTTTACTAGGCCTTTTAAGATCAAAGACAGTAATTTATGTTACTCATCAAGTTGAGTTCTTACCTGCTGCTGACCTTATATTGGTGATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATGCTGATCTTCTTAACAATGGAACCGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACACTTGATTCAATAGATGAAGGAATAGTATCCAATGAAATAAGTACCTTGGAACAAGATTTAGATGTTCCTGTTTCTCGGGGTGGAGAGAAAGAAGAGGAAAAGAAAGATGAGCAAAATGGTAAAATTGATAACAAAGGTGATGAGGCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGAGAGAGAGGTAGAGTTGGATTTTCAGTGTATTGGCAATTTATCACTATGGCATATGGAGGTGCTCTTGTTCCTTTCATGCTATTGGCTCAGATTCTCTTCCAAGTTCTCCAAATTGGTAGCAACTATTGGATGGCTTGGGCAACACCAATCTCACAAGATGTGGAGCCACCTGTTTTGGAAACAACTCTTATAGCTGTCTATGTTGCTTTGGCTATTGCAAGTTCTTTCTGCATTCTTGCAAGGACAACACTTCTTGCCACTGCTGTATATAAGACAGCTACCATAATCTTCAATAAGATGCACTTCTGCATCTTTCGCGCACCAATGTCATTCTTTGATTCCACTCCAAGCGGCCGAATTCTAAATAGAGTTTCTACTGATCAAAGTGCAGTAGACACAAACATTCCTTATCTAGCTGCTTCATTTGCCTTTCTCTTCATCCAACTTTTGGGAGTTATAGCAGTGATGTCTCAATCTGCATGGCAAGTTTTCATTGTCTTTATACCTGTGATAGCAATCAGCATTTGGTATCAGCAATATTACTTACCACCAGCTCGAGAGCTATCGCGCTTAGTTGGAGTATGCAAAGCACCAATCCTTCAGAACTTTTCTGAAACAATTTCTGGTACTTCAACCATCAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAAAGAATATGAAACTAATTGATGGATATTCGCGACCACAGTTCAATAGTTCTGGTGCTTCTGCATGGTTATGCTTCCGTTTGGATATATTGTCTTCAATCACATTTGCATTTTCTGTGATATGCTTGATGGTTGTTCCTCAAGGAGTCATAGATCCAGGCCTTGCTGGTTTATCTGTTACCTATGGACTCAATTTGAACTCGTTAAACGCTATGGTGATTCGACTTCTTTGTGAATTGGAGAACAAGATGATATCAGTAGAAAGAATACTTCAATATACATCTATTCCTAGTGAGCCTCCCCTTGTTGTGCAAGAAAATAGACCAAGTCCTTCTTGGCCATCATATGGAGAAGTTGATATATGCAACTTGCAGGTTCGTTATGCTCCACACCTTCCACTTGTGTTGCATGGCCTCACATGCACATTTCATGGAGGATTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGCAAAACAACTCTCATACAAACTCTCTTCCGAATCATCGAACCAGCTGCTGGAGAAGTTGTGATTGATGGCATCAACATCTCTTCAATAGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTGAGAAACAATCTGGATCCACTAGAGGAGTACACTGATGAACAAATTTGGGAGGCCCTTGAAAAGTGTCAACTTGGTGATGAAGTTAGAAGAAAAGAAGGAAAGTTGGACTCTCCAGTTAGCGAAAACGGCGAGAATTGGAGCATGGGACAGAGGCAATTGGTGTGCCTTGGTAGGGTGCTTCTAAAAAAGAGCAAGGTATTGGTGCTTGACGAAGCGACTGCATCAGTTGATACTGCCACAGACAATTTGATTCAACAAACTCTTAGGCTGCATTTCGCTGACTCCACAGTCATAACCATTGCGCATAGAATCACTTCTGTTATCGACAGTGATATGGTCTTGCTTCTTCATCAAGGACTAATTGAAGAGTATGATTCACCTTCAAAATTGCTAGAGGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTACACAATGAGATCCAAAACCAGTTTTGAGAAATCTTCTGATCACTGA 4479 0.3941 MSQISSYLSLTYSDMSFLLQPIFLHAFSAIIHLILVAMVLVSWLWKKITVGEASDESNKHKKLKNKVMLRKTLFCSLGVSAFNFVLCLYSSYFLEEEGKLVTLLDLAIKTLAWGLISVCMHKRFFFFLIKPWCVLYFFLSCYSFVVDIIVLLYEKNVALPAQYLVSDVVSASVGLFFCYVVCFVKNINECEEDHVSDDLQDPLLLNNGNAPVCVTPFSSAGIFSILTFSWVGPLIALGNKKTLDPEDVPQLDKNDSVFGAFPTFREKIEKDCSAEINHITTLKLVKLLVLSAWREILFTAVLALLNTLASYVGPYLIDAFVQYLAGQRVNEKQGYALVSAFFLSKLVESLSQRHWLFRLQQVGIRIQALLVTLIYNKALVLSCQSRKGHTSGEMINFVAVDAGRIGNFTWYMHDLWRVALQVALALLLLYKNVGLASIAAFVATIIVMLVNVPLGKLQKKFQKNFMDSKDTRMKATSEILRNMKILKLQGWEMKFLSKITELRKTEEGWLKKSAYNSAISAFVFWIAPTFVSVVTFGSCMLMGIPLESGKILSALATFRILQVPIYNLPNTISAILQTKVSLDRISSFLRLEDLQSDVVEKLPFGTSDKAIEVTNGSFSWDLSSPNTTLKNINLEVFHGMRVAVCGTVGSGKSTLLSCILGEVPKVSGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDRERYEKVLEACSLKKDLEILPFGDQTIIGERGINLSGGQKQRVQIARSLYQDADIYMFDDPFSAVDAHTGSHIFKECLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNNGTDFMELVGAHKKALSTLDSIDEGIVSNEISTLEQDLDVPVSRGGEKEEEKKDEQNGKIDNKGDEAKGQLVQEEERERGRVGFSVYWQFITMAYGGALVPFMLLAQILFQVLQIGSNYWMAWATPISQDVEPPVLETTLIAVYVALAIASSFCILARTTLLATAVYKTATIIFNKMHFCIFRAPMSFFDSTPSGRILNRVSTDQSAVDTNIPYLAASFAFLFIQLLGVIAVMSQSAWQVFIVFIPVIAISIWYQQYYLPPARELSRLVGVCKAPILQNFSETISGTSTIRSFDQQSRFQEKNMKLIDGYSRPQFNSSGASAWLCFRLDILSSITFAFSVICLMVVPQGVIDPGLAGLSVTYGLNLNSLNAMVIRLLCELENKMISVERILQYTSIPSEPPLVVQENRPSPSWPSYGEVDICNLQVRYAPHLPLVLHGLTCTFHGGLKTGIVGRTGSGKTTLIQTLFRIIEPAAGEVVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALEKCQLGDEVRRKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFADSTVITIAHRITSVIDSDMVLLLHQGLIEEYDSPSKLLEDKSSSFAQLVAEYTMRSKTSFEKSSDH 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00200 1492 Pfam ABC transporter transmembrane region 297 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00200 1492 Pfam ABC transporter transmembrane region 927 1179 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00200 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1476 IPR003439 GO:0005524
Aip07g00200 1492 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 103 1488 - -
Aip07g00200 1492 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 103 1488 - -
Aip07g00200 1492 MobiDBLite consensus disorder prediction 861 897 - -
Aip07g00200 1492 MobiDBLite consensus disorder prediction 864 897 - -
Aip07g00200 1492 SMART AAA_5 638 811 IPR003593 -
Aip07g00200 1492 SMART AAA_5 1268 1453 IPR003593 -
Aip07g00200 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 833 IPR027417 -
Aip07g00200 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 925 1205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00200 1492 CDD ABCC_MRP_domain1 611 811 - -
Aip07g00200 1492 Gene3D ABC transporter type 1, transmembrane domain 269 592 IPR036640 GO:0005524|GO:0016021
Aip07g00200 1492 Gene3D ABC transporter type 1, transmembrane domain 885 1223 IPR036640 GO:0005524|GO:0016021
Aip07g00200 1492 SUPERFAMILY ABC transporter transmembrane region 923 1224 IPR036640 GO:0005524|GO:0016021
Aip07g00200 1492 SUPERFAMILY ABC transporter transmembrane region 290 593 IPR036640 GO:0005524|GO:0016021
Aip07g00200 1492 Gene3D - 1225 1478 IPR027417 -
Aip07g00200 1492 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 611 834 IPR003439 GO:0005524
Aip07g00200 1492 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 297 577 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00200 1492 Pfam ABC transporter 629 763 IPR003439 GO:0005524
Aip07g00200 1492 Pfam ABC transporter 1259 1407 IPR003439 GO:0005524
Aip07g00200 1492 ProSitePatterns ABC transporters family signature. 736 750 IPR017871 GO:0005524
Aip07g00200 1492 CDD ABC_6TM_ABCC_D2 923 1217 IPR044726 GO:0140359
Aip07g00200 1492 Gene3D - 593 850 IPR027417 -
Aip07g00200 1492 CDD ABC_6TM_ABCC_D1 298 585 IPR044746 GO:0140359
Aip07g00200 1492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1472 IPR027417 -
Aip07g00200 1492 CDD ABCC_MRP_domain2 1240 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00200 Aip-Chr7 1646822 1652501 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00200 611 841 Calmodulin-binding Proteins AT2G36910 29.084 5.78e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00200 - K05666 gmx:100777836 2246.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00200 07 1646822 1652501 Aip07g00200 07 1646822 1652501 ECH