Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00199 ATGATGTCTTATGTTTCCTCGTACCTTTCCCTCATGCACTCTCACATAAGCTTTCTTCTCCAACCCATTTTTCTTCATGCATTCTCAGCCATCATCCACCTCCTACTGTTGGCTATAGTTTTGGTTTCATGGCTTTGGAAGAAGATCATCACTGTTGGAGAAACTGGAGATGACTCCAATAACAAGCATCAGAAGCCTTTGAATAATGCTGTGTTAAGAAAGACTACTTTGTTTTGTTCATTAGGTGCTTCTGCTTTCAATCTTATCCTCTGCCTCTATAGTTACTACTTCTTAGGAGAAAAAGAAAAAGAAGAAGAAAAGCTCGTGACCCATTTGGATTTAGGTCTAAAAACTCTTGCTTGGGGTGTTATTAGTGTTTGCTTGCACAAAAGCTTGCTCTTATTTAGTTCAGGTGATGGTAGAAGAAGGTTCTCTTTCATGTTCAGAGCATGGTGTGTTTTCTACTTTTTTGTTTCATGTTACTCCTTTGTAGTGGACTTTGTTCTTCATTTTTATGAAAAGCACGTGACTTTACCAGCTCAGGACATAGTTTCTGATGTGATTTCAGCTTCTGTGGGTTTATTCTTTTGCTATGTGGTGTGTTTTGTGAAGAAAATTGATGAGTTTGAAGAGGATCATATCATTGATGATCTTCAAGATCCTTTACTATTGGATAATGGTAATGCAACTGTTTGTAGTAATGCCTCTGGGGCTGACATTGTTACCCCTTTCTCAAATGCTGGGATTTTCAGCATTCTAACATTCTCTTGGGTGGGCCCTCTTGTTTCTCTTGGCAATAAGAAAACCTTGGACCTTGAGGATGTTCCACTACTTGATAAAAGAGATAGTGTAGTTGAAATTTTTTCAACTTTCAGAGAAAAAGTTGAAGAAGATTGTGGTGCAATTAATCACATAACCACTCTTAAACTGGTGAAGTTGTTAGTACTATCAGCATGGAAAGAGATTCTCTTCACTGCATTTCTTGCATTGTTGAATGCTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGATGGTCAAAGGGTTTATGAGAATCAAGGCTATGTTCTTGTTTCTGCATTTTTCTTATCAAACCTTGTTCAGTCCCTATCACAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGGATTAGAATCCAAGCACTTCTTGTGACTATGATCTATAACAAAGCCTTGACCCTTTCATGTCAATCAAAGCAGGGTCATACTTCTGGTGAAATGATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGAACTTTCACTTGGTATATGCATGATTTGTGGAGGGTAGCTTTGCAAATTGTCTTAGCCTTGTTGATTTTGTATAGAAGTGTTGGTCTTGCTTCAATTGCCGCATTTGTGGCCACTGTCATTGTCATGTTGGTAAATGTTCCTGTGGGAAAAATGCAACAGAAGTTTCAGAAAAACTTGATGGATTCAAAGGACGCAAGAATGAAGGCAACATCTGAGATTCTAAGGAACATGAAGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAAATGAGCTTAGGAAAACTGAGGAAGGGTGGTTAAAGAAATCTGTATACAATTCAGCTATCAGTGCTTTTGTGTTCTGGATTGCTCCGTCTTTTGTATCTGTTGTTACTTTTGGTACATGTATGGTTATGGGGATTCCACTTGAATCAGGGAAGATCTTATCAGCACTTGCTACATTTAGAATTCTTCAAGGTGCCATATATAATCTTCCAGAAACAATATCAGCTATAGTACAAACTAAGGTTTCTCTTGATAGGATTTCTTCTTTCCTTCGTCTCGGTGACTTGCAATCTGATGTTGTAGAGAAGCTTCCTTTAGGTACTTCTGATAAAGCAATCGAAGTAACTAATGGAAACTTCTCTTGGGATCCATCTTCTCCAAATACAACATTGAAGAACATAAATTTTGAAGTTTTCCATGGCATGAGGGTTGCTGTTTGTGGGACAGTTGGATCAGGAAAATCTACATTGCTATCTTGTATGTTGGGAGAGGTACCGAAGGTTTCGGGGACTCTAAAAGTGTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGAAAGATAGAGGATAATATACTGTTTGGTAAAGAGATGGATAAGGAAAAGTATGAAAAGGTTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGATTTTATCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATATGAGTGGTGGACAAAAACAAAGGATTCAAATAGCACGTGCTTTATATCAAGATTCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTCTTTAAGGAATGTTTGCTAGGCCTTTTAAGATCAAAGACAGTGATTTATGTTACTCATCAAGTTGAGTTCTTACCGGCTGCTGATCTTATATTGGTAATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATGCTGATCTGCTTAACAATGGAACTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACACTTGATTCAATAGATGAAAGAATAATATCCAATGAAATATGTACCTTGGAACAAGATTCAGATTTTCCTATTTCTCAGGGTGGAGAAGAAGAAGAGGAAAAGAAAGATGAGCAAAATGGTAAAACTGGTAAGAAAGGTGATGAGGCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGAGAGAGTGGTAGAGTTGGATTTTCAGTGTATTGGCAATATATCACTATGGCATATGGAGGTGCTCTTGTTCCTTTCATTCTGTTGGCTCATACTCTCTTCCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACACCAATCTCACAAGATGTCGAGCCACCTGTTTCTGGAACAACTCTTATAGCAGTCTATATTGCTTTGGCTGTTGGAAGTTCTTTCTGCATTCTTGCAAGGACTATACTATTTGCCACTGCTCTATGTAAGACAGCTACCATAATCTTCAATAAGATGCACTTCTGCATTTTTCGCGCTCCAATGGCATTCTTTGATTCCACTCCAAGCGGCCGAATTCTTAATAGAGCTTCTACTGATCAAAGTTCAGTAGACACTGAGGTTCCTTATCAGTTTGCTTCATTTGTTTTTCCACTGATCCAACTTGTGGGAATTATAGCAGTGATGTCTCAAGCTGCATGGCAAGTTTTTATTGTCTTTATACCTGTGATTGCAATCAGCATTTGGTATCAGCAATATTATTTGCCAGCAGCTCGAGAACTATCGCGTTTAGTTGGAGTATGCAAAGCCCCAATCATTCAGAACTTTTCTGAAACAATTTCTGGTACACCAACCATCAGAAGCTTTGATCAGCAGTCCAGATTTCAGGAAAAGAATTTGAAACTGATCGACAGATATTCGCGACCAGAGTTCAATAGTGCTGCTGCATCAGAATGGTTGTGCTTCCGTTTAGATATATTGTCTTCTATCATCTTTGCATTTTCCTTGATATTCTTGATATCCATTCCAGAAGGATTCATAGATCCAGGCCTTGCTGGTTTATCTGTTACCTATGGACTAAATTTGACCACAATAAATGCTTGGGTGATATGGAGTCTTTGCAGTTTGGAGAACAATATTATATCAGTGGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCCCTTGTTGTCGAAGAAAATCGACCGGATCCTTCTTGGCCTTCACACGGCGAGGTTAATATACATGAATTGCAGGTAGTTCGTTATGCTCCACACCTTCCACTTGTGTTGCATGGCCTCACATGCACATTTCGCGGAGGATGGAGAACTGGAATTGTTGGTAGAACAGGAAGTGGCAAAACAACTCTCATACAAACTCTTTTCCGAATTGTTGAACCAACTGCTGGAGAAGTTGTGATTGATGGCATCAACATCTCTTCAATAGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGGACTGTGAGAAACAATCTGGATCCACTAGAGGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGTGATGAAGTTAGAAAGAAAGAAGGAAAGCTGGACTCTCCAGTTAGTGAGAATGGTGAAAATTGGAGCATGGGTCAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTTCTGAAGAAGAGCAAGGTATTGGTACTCGACGAAGCGACTGCATCAGTTGATACTGCTACGGACAATTTAATTCAACAAACTCTTAGGTTGCATTTCACTGAGTCCACAGTCATAACCATTGCGCATAGAATCACTTCTGTTCTTGACAGCGATATGGTCTTGCTTCTTCATCAAGGACTAATTGAGGGGTATGATTCACCTTCAAAATTGCTAGAGGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACAATGAGATCTAAGTCCACTCTTCAGAAATTTGCTTATCAATGA 4560 0.3897 MMSYVSSYLSLMHSHISFLLQPIFLHAFSAIIHLLLLAIVLVSWLWKKIITVGETGDDSNNKHQKPLNNAVLRKTTLFCSLGASAFNLILCLYSYYFLGEKEKEEEKLVTHLDLGLKTLAWGVISVCLHKSLLLFSSGDGRRRFSFMFRAWCVFYFFVSCYSFVVDFVLHFYEKHVTLPAQDIVSDVISASVGLFFCYVVCFVKKIDEFEEDHIIDDLQDPLLLDNGNATVCSNASGADIVTPFSNAGIFSILTFSWVGPLVSLGNKKTLDLEDVPLLDKRDSVVEIFSTFREKVEEDCGAINHITTLKLVKLLVLSAWKEILFTAFLALLNALASYVGPYLIDAFVQYLDGQRVYENQGYVLVSAFFLSNLVQSLSQRHWFFRLQQVGIRIQALLVTMIYNKALTLSCQSKQGHTSGEMINFMTVDAERVGTFTWYMHDLWRVALQIVLALLILYRSVGLASIAAFVATVIVMLVNVPVGKMQQKFQKNLMDSKDARMKATSEILRNMKILKLQGWEMKFLSKINELRKTEEGWLKKSVYNSAISAFVFWIAPSFVSVVTFGTCMVMGIPLESGKILSALATFRILQGAIYNLPETISAIVQTKVSLDRISSFLRLGDLQSDVVEKLPLGTSDKAIEVTNGNFSWDPSSPNTTLKNINFEVFHGMRVAVCGTVGSGKSTLLSCMLGEVPKVSGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDKEKYEKVLEACSLKKDLEILSFGDQTIIGERGINMSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFKECLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNNGTDFMELVGAHKKALSTLDSIDERIISNEICTLEQDSDFPISQGGEEEEEKKDEQNGKTGKKGDEAKGQLVQEEERESGRVGFSVYWQYITMAYGGALVPFILLAHTLFQVLQIGSNYWMAWATPISQDVEPPVSGTTLIAVYIALAVGSSFCILARTILFATALCKTATIIFNKMHFCIFRAPMAFFDSTPSGRILNRASTDQSSVDTEVPYQFASFVFPLIQLVGIIAVMSQAAWQVFIVFIPVIAISIWYQQYYLPAARELSRLVGVCKAPIIQNFSETISGTPTIRSFDQQSRFQEKNLKLIDRYSRPEFNSAAASEWLCFRLDILSSIIFAFSLIFLISIPEGFIDPGLAGLSVTYGLNLTTINAWVIWSLCSLENNIISVERILQYTSIPSEPPLVVEENRPDPSWPSHGEVNIHELQVVRYAPHLPLVLHGLTCTFRGGWRTGIVGRTGSGKTTLIQTLFRIVEPTAGEVVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFTESTVITIAHRITSVLDSDMVLLLHQGLIEGYDSPSKLLEDKSSSFAQLVAEYTMRSKSTLQKFAYQ 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00199 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1264 1499 IPR027417 -
Aip07g00199 1519 Pfam ABC transporter 1286 1434 IPR003439 GO:0005524
Aip07g00199 1519 CDD ABC_6TM_ABCC_D2 949 1243 IPR044726 GO:0140359
Aip07g00199 1519 Gene3D - 1251 1505 IPR027417 -
Aip07g00199 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 951 1231 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00199 1519 Gene3D - 622 879 IPR027417 -
Aip07g00199 1519 Pfam ABC transporter 655 789 IPR003439 GO:0005524
Aip07g00199 1519 MobiDBLite consensus disorder prediction 894 924 - -
Aip07g00199 1519 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Aip07g00199 1519 SUPERFAMILY ABC transporter transmembrane region 950 1250 IPR036640 GO:0005524|GO:0016021
Aip07g00199 1519 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 122 1515 - -
Aip07g00199 1519 SMART AAA_5 664 837 IPR003593 -
Aip07g00199 1519 SMART AAA_5 1295 1480 IPR003593 -
Aip07g00199 1519 CDD ABC_6TM_ABCC_D1 336 611 IPR044746 GO:0140359
Aip07g00199 1519 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 122 1515 - -
Aip07g00199 1519 Gene3D ABC transporter type 1, transmembrane domain 912 1249 IPR036640 GO:0005524|GO:0016021
Aip07g00199 1519 Gene3D ABC transporter type 1, transmembrane domain 303 617 IPR036640 GO:0005524|GO:0016021
Aip07g00199 1519 Pfam ABC transporter transmembrane region 323 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00199 1519 Pfam ABC transporter transmembrane region 957 1193 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00199 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 859 IPR027417 -
Aip07g00199 1519 CDD ABCC_MRP_domain1 637 837 - -
Aip07g00199 1519 CDD ABCC_MRP_domain2 1266 1487 - -
Aip07g00199 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Aip07g00199 1519 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip07g00199 1519 SUPERFAMILY ABC transporter transmembrane region 316 615 IPR036640 GO:0005524|GO:0016021
Aip07g00199 1519 MobiDBLite consensus disorder prediction 887 924 - -
Aip07g00199 1519 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1270 1503 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00199 Aip-Chr7 1630205 1635835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00199 637 878 Calmodulin-binding Proteins AT2G36910 29.572 1.36e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00199 - K05666 gmx:100777836 2221.05