Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00196 ATGGGGTTGTGGAGTCGCGCGGCTGCCATCCGTCTGTCTCTTCCCGGCGTCGACCTTTCGGCTCTCCTCCACAGTGCGCGAAACCCCTGCTTCCTCCTCCACGGGATTGACTTCTCAATCAACCACCAGGCCAGGCCACCATTCTCTGTTTTTAATAGGCCTCTGGATGATGCTTCTGACCCCTCAAGACCAATTGAATTCTTGACAGATGTTGATTACCTCAATAAGGAAAATGGCCATCAGAGGGATGCTGGGTCCACTGCATCAACAGCTATGGTGTTGGGCGACCGAATTCTTGTTACAAATGTTGGCAATTCCAGAGTAGTTACATCCAGAGCTGGTACAGAGTATTGCAACAGAAATGCAGAGTGA 372 0.5081 MGLWSRAAAIRLSLPGVDLSALLHSARNPCFLLHGIDFSINHQARPPFSVFNRPLDDASDPSRPIEFLTDVDYLNKENGHQRDAGSTASTAMVLGDRILVTNVGNSRVVTSRAGTEYCNRNAE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00196 123 Gene3D - 47 122 IPR036457 -
Aip07g00196 123 Pfam Protein phosphatase 2C 75 117 IPR001932 -
Aip07g00196 123 SUPERFAMILY PP2C-like 78 115 IPR036457 -
Aip07g00196 123 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 69 115 - -
Aip07g00196 123 PANTHER ALPHABET, ISOFORM E-RELATED 69 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00196 Aip-Chr7 1601777 1604967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00196 69 114 PP2C-type Phosphatase Gene Family AT5G10740 63.043 6.18e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00196 K17506 - gmx:100776867 78.5666