Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00187 ATGGAGCATCATCACTACTCCTCATCATCATCCTTACCCTTCTTTCTATTTTCGTTAATAATCTTCATCCTTTTCATATCACAACTTCTCAAATTGTTAGATAAGAAATCCAAAGTCACAAGCAAGAAAAAAGAGAAGCTTCCTCCGGGGCCATGGACACTACCTCTAATCGGTAGCATACACCACTTAGTTGGAAAATCTCTACCCCATCATCGTATGAGAGACTTAGCAAAAAAATATGGTCCTCTCATGCACTTTAAACTCGGTGAAGCATCAATCATGGTAGTTTCTTCTCCAGAAGTTGCCAAAGAAGTATTTAAAACCTTTGATATCAACTTTGCCGAAAGACCTAGACATTTGGGTGCAGATATCTTGACCTATGGTTCCACCAACATAGCCACCGCGCGATACGGTGGCTATTGGAAGCAACTAAGAAGAATATGCTCAATGGAACTTCTTAGCCCTAAGCGTGTGAGTTCGTTCAAATCAATAAGGGAAGAAGAGGTAATGAATTTGATAACATGGATTTCTGATAATACTGAATCTTGTGTTAATCTTAGTGAGAAAGTTGCTTCTTTGACAAGTGCAATCACTGCTAGGGCAATTTTTGGAGAAAAGTGTAAGGATCAAGAACAATTCATTTCATTGTTGAAGAATCTTGGAAAGATTGTGGAACGTGTTTTTGTTGTATTTAGTCTTTTTCCGTCTCACACATGGCTCCATTATATAAGTGGAGCGAAACGCGAGACGGAAAAGGTGCATAAAAATTTTGATATTGTAATTAAAAATATTATAAAAAATAAAATAATAAGGATGAAAAATAATGAGGATGATGAGGATAAATCTCACACGGTGGATCTTCTTTCTATTCTCCTAAATATTGTGGAAGATCATGGAGCTTATGAATATCCTATGACAATCAACAATGTCAAAGCTATTGTTTTTGACATGTTTGTTGCCGGAGTTGAAACATCATCTGCAGTGATAGAATGGACGATTTCTGAGCTAATGAAGAGTCCAAAAGCAATGGCAAGAGCTCAAGAAGAGATTAGAAAAGCTTTTGGCGCCAAAGAATCATCATCATCATCATCTATTGAGAATCTAACATATCTAAAAGCAGTTATCAAAGAGACAATGAGATTACACCCTCCATTTCCTATACTGCTTCCAAGAGAATGTAGAGAGACATGTGAGATCAACGGCTACACAATAGGCGCAGGAAGCACAGTGATAGTAAATGCATGGGCGATAGGAAGAGATCCTAAATATTGGGGAGGCAAAGAAGACGCTGAGAGTTTCCGTCCTGAAAGGTTTCTAGAATGTTCCATTGATTACAAAGGTTCCAATTTTGAGTTCATACCTTTTGGTGCTGGCAGGAGGATATGTCCAGGCTTGTATTTTGCTGTTTCCAGCATTGAAGTTTGTGTTGCACAACTTTTGTATTATTTCGATTGGCAAGTTCCGAATAATGGAGACTTGGATATGATTGAAGATTTGGGAAGCACAGCAAGAAGGAAGAATGATCTTATCTTAGTTCCAATTCCATCGAATAATAAtaataatacttaa 1569 0.3741 MEHHHYSSSSSLPFFLFSLIIFILFISQLLKLLDKKSKVTSKKKEKLPPGPWTLPLIGSIHHLVGKSLPHHRMRDLAKKYGPLMHFKLGEASIMVVSSPEVAKEVFKTFDINFAERPRHLGADILTYGSTNIATARYGGYWKQLRRICSMELLSPKRVSSFKSIREEEVMNLITWISDNTESCVNLSEKVASLTSAITARAIFGEKCKDQEQFISLLKNLGKIVERVFVVFSLFPSHTWLHYISGAKRETEKVHKNFDIVIKNIIKNKIIRMKNNEDDEDKSHTVDLLSILLNIVEDHGAYEYPMTINNVKAIVFDMFVAGVETSSAVIEWTISELMKSPKAMARAQEEIRKAFGAKESSSSSSIENLTYLKAVIKETMRLHPPFPILLPRECRETCEINGYTIGAGSTVIVNAWAIGRDPKYWGGKEDAESFRPERFLECSIDYKGSNFEFIPFGAGRRICPGLYFAVSSIEVCVAQLLYYFDWQVPNNGDLDMIEDLGSTARRKNDLILVPIPSNNNNNT 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00187 522 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 515 - -
Aip07g00187 522 Pfam Cytochrome P450 48 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Aip07g00187 522 SUPERFAMILY Cytochrome P450 48 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PANTHER CYTOCHROME P450 71B11-RELATED 15 515 - -
Aip07g00187 522 Gene3D Cytochrome P450 39 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip07g00187 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00187 Aip-Chr7 1439171 1474551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00187 43 503 Cytochrome P450 AT3G48310 39.479 2.52e-117 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00187 - K23807 gmx:100779851 602.053