Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00181 ATGGGGTTGTTTCCTAGAGTTATTATGGTCTTGTTTGTTGTTATGGTTTTGAGTTTGAAGGTTCAGGTGAATTTAGCAGCAGCAGCAGAAGAAGAAGAAGGTTATTTCAATGGGAATGTTGATGATGATGATGATGATAATGTGAAGAGCTACATTAGTTGGGAGGATTTGGAAGTGGGGGAGGAGAGTTTGGAATTGAAATCAAAGAAAGAGGTTAGAGTTATTGTGGTTGATCAACATGGTAAGGGACATTCAAAAACTGTTCAAGGTGCTGTGAATATGGTTCCAGATCACAACAAAGAAAGGGTCAAAATTTACATTTATCCAGGAACTTATAGGGAAAAAGTGCTTGTGCCAAAGAGCAAACCTTATATTTCATTTATAGGTAAAAGAAATGAAACATCAAGTGCTGTGATTACTTGGAACAGCAAATCATCTGATCAAGGCCCTAATGGCCAAACATTGGGAACCTATGGTTCAGCAACTGTTGGAATTGACTCTGATTATTTCTGTGCCTCTCAGGTCACTTTTGAGAATTCAGTGGTTGCAATGCCTGGTGGAAATGGAATGCAAGCAGTGGCACTAAGGGTAAACAGTAATAGAGCCATGTTCTATAAAGTTAAGATCAAAGGAACACAGGACACTCTCTTAGACAACACAGGAACACATTACTTCTATAAATGTTACATCCAAGGAAAGATTGATTTCATCTTTGGCAGTGCTAAATCACTCTATGAGAAATGTAGGCTTGAGTCAATAGCTGAGAGCTTTGGAGCAATTGCAGCACATCATAGGGATTCAGAAAAGCAAGACACAGGATTTTCATTTGTAGGATGCAAGATTAGAGGGAGTGGGAGTGTGTACCTTGGAAGAGCATGGGGTAACTACTCAAGAATTATATACTCCAATTGTTACATGGATGATATCATCAATCCTCAAGGCTGGTCAGAATGGAACCATCCAGAAAGAAAAAGGACTGCAGTGTTTGGTGAATATAAGAACATGGGAAGAGGAGCAGATAGAAGACAGAGAGTGGCATGGTCAAAATCATTCAACTATCAGGAAGCAAGGCCTTTCCTTGGCAAGAGCTTCATCAATGGAGATCAATGGCTCAGACTCTAG 1122 0.3975 MGLFPRVIMVLFVVMVLSLKVQVNLAAAAEEEEGYFNGNVDDDDDDNVKSYISWEDLEVGEESLELKSKKEVRVIVVDQHGKGHSKTVQGAVNMVPDHNKERVKIYIYPGTYREKVLVPKSKPYISFIGKRNETSSAVITWNSKSSDQGPNGQTLGTYGSATVGIDSDYFCASQVTFENSVVAMPGGNGMQAVALRVNSNRAMFYKVKIKGTQDTLLDNTGTHYFYKCYIQGKIDFIFGSAKSLYEKCRLESIAESFGAIAAHHRDSEKQDTGFSFVGCKIRGSGSVYLGRAWGNYSRIIYSNCYMDDIINPQGWSEWNHPERKRTAVFGEYKNMGRGADRRQRVAWSKSFNYQEARPFLGKSFINGDQWLRL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00181 373 Pfam Pectinesterase 75 368 IPR000070 GO:0030599|GO:0042545
Aip07g00181 373 SUPERFAMILY Pectin lyase-like 74 371 IPR011050 -
Aip07g00181 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 49 373 - -
Aip07g00181 373 Gene3D - 69 373 IPR012334 -
Aip07g00181 373 PANTHER PECTINESTERASE QRT1 49 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00181 Aip-Chr7 1404654 1406600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00181 2 325 Carbohydrate Esterase AT5G55590 53.488 4.11e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00181 K01051 - gmx:100813382 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00181 07 1404654 1406600 Aip07g00181 07 1404654 1406600 ECH