Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00157 ATGGATATAGCACATTACTATTTGGATGGCAATGCTGATGCTGTGGAGTTTTGTCCACATGATTCGTACCACCATGTTCTGGCTGCCTCCACATACAATCTCCAAGAAGGTGACCGTCCCAGTCGACATGGAAGCATTTCTCTCTTCAGTGTTGATGGCAGTGACATAGCTGGTGGTGATGACCACCTTGACTTGGTTTGCAGTGTGGAGACCTCTGGCATTTTCGACATAAAGTGGAGCCCGCCCGGACAGCATTCAAATCCTTTTCTTTCTCAAGCTGATGCTGATGGATACTTGAGAATTCATGTGCTGGAAAGTAGCTGTAACGGGGTTGAAGGGATTAATTTAAAGCATATGATCAGTGAAAAAATCAGCGACTCTATGTGCTTGTACCTGGACTGGAACCCTTCAGGCACATCCATGACAGTGGGGCTTTCTGATGGCTCTGTATCCATTGTTTCTTTCCTTGAATCCAAGTTGGAAATACAAGAAGAATGGAAGGCACATGACTTTGAACTCTGGACAACCGCATTTGATATCCACCAACCAAATTTGAATTCCAAAGCTCACAAAATGGGTGTTTGTTGCATTCAAAAGCGTTCTCATGATCCAAATAGCTTAGTAACCGGTAGCTACGACGAAACCTTGAGGGTATGGGACTTGAGAACAATCTCAAAACCTGTTAATGAGACTTCAATTGGCTTAGGGGGAGGAGTTTGGAGGGTGAAGCACCATCCCTACATTCCAAACTTGGTCTTGGCTGCATGTATGCACAATGGTTTTGCAATTGTGTCCATCAAGGGCAACGAAGCGCAAGTGTTGGAAACTTACAAGAAGCATGATTCCCTTGCATATGGAGCAGATTGGCAGAAAGGTGAAGCAAATCAGAGAGTTGAGAGAACCAAACCAATTGTGGCTACTTGCTCATTCTATGACAAACTTGTTCGAGTATGGAAGCCAGAAAATGAGATTAACTTCAACGTAACCATCGTCTCACTCTACTCCAACTACCTCCGCAACCGTCTTCGCGCTTTCTACCCCTTCCATCCATCCAATCTCCTCCGCTTCCTCTCCAACCTCGCCGCTCCTTTCCGATCAATCCACCACCGCCAATGCATACCTCTTCCTCTCCCTTCCAATTTCCGCGACTCTTCCATGATCATAAAGGAATCTAGAGTGCATGGTGTATTGGAGGATATACTGGAACATGTTTTGTTGAACTTGCATAGTATAGAGAAGAATCTCCAGTTTTGGCAATCTAAATCAGAGACATTTAATGTGTTTGATTTTCTGAAAGATATTCTCAACAAGGTTCCTGATTTAGGTGGTTCTGGTGCGACGGGTGATGATCGTTCTATCCCTAAGAGGAGGAAAGTTGCGGAAGGTGATGATAATGACAGCGATGAGGAGCAAAAGAGAAATAAGATGCTAGAGGCCAGAAATACTAGTGGCAGAGGAAGGGGTAGGGGGAGAGGTAGAGGTCGTGGCCGAGGACATAGAACAGCAGATCATGATTATGAAATGATTTCACATGTCAAGTTTGAAGATGAATATGATGTATTGAAGCAAAATGGCAAGCACACATAG 1587 0.4442 MDIAHYYLDGNADAVEFCPHDSYHHVLAASTYNLQEGDRPSRHGSISLFSVDGSDIAGGDDHLDLVCSVETSGIFDIKWSPPGQHSNPFLSQADADGYLRIHVLESSCNGVEGINLKHMISEKISDSMCLYLDWNPSGTSMTVGLSDGSVSIVSFLESKLEIQEEWKAHDFELWTTAFDIHQPNLNSKAHKMGVCCIQKRSHDPNSLVTGSYDETLRVWDLRTISKPVNETSIGLGGGVWRVKHHPYIPNLVLAACMHNGFAIVSIKGNEAQVLETYKKHDSLAYGADWQKGEANQRVERTKPIVATCSFYDKLVRVWKPENEINFNVTIVSLYSNYLRNRLRAFYPFHPSNLLRFLSNLAAPFRSIHHRQCIPLPLPSNFRDSSMIIKESRVHGVLEDILEHVLLNLHSIEKNLQFWQSKSETFNVFDFLKDILNKVPDLGGSGATGDDRSIPKRRKVAEGDDNDSDEEQKRNKMLEARNTSGRGRGRGRGRGRGRGHRTADHDYEMISHVKFEDEYDVLKQNGKHT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00157 528 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 187 223 - -
Aip07g00157 528 Pfam WD domain, G-beta repeat 188 220 IPR001680 GO:0005515
Aip07g00157 528 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 223 IPR001680 GO:0005515
Aip07g00157 528 ProSitePatterns Trp-Asp (WD) repeats signature. 207 221 IPR019775 -
Aip07g00157 528 PANTHER DIPHTHINE METHYLTRANSFERASE 186 323 - -
Aip07g00157 528 PANTHER DIPHTHINE METHYLTRANSFERASE 2 185 - -
Aip07g00157 528 Gene3D - 5 327 IPR015943 GO:0005515
Aip07g00157 528 SMART WD40_4 270 319 IPR001680 GO:0005515
Aip07g00157 528 SMART WD40_4 180 220 IPR001680 GO:0005515
Aip07g00157 528 SMART WD40_4 113 154 IPR001680 GO:0005515
Aip07g00157 528 SMART WD40_4 60 103 IPR001680 GO:0005515
Aip07g00157 528 MobiDBLite consensus disorder prediction 441 506 - -
Aip07g00157 528 MobiDBLite consensus disorder prediction 450 485 - -
Aip07g00157 528 SUPERFAMILY WD40 repeat-like 41 322 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00157 Aip-Chr7 1227149 1232411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00157 423 478 CCAAT-HAP5 Transcription Factor Family AT3G12480 51.613 5.03e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00157 K17868 - gmx:100811574 518.85