Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00140 ATGAATTCTAGGTGCTTCCTTCCACAAGAGTCCTTATTCATCAACTCTGGCAGCATGGCTTCATTTTCTTCAAATTCTGCAGCTGCAGCAGCAGAAGATAGCAGGGTGAATAGTACCAGAAACCGGCCTCTTCCACGTGCCTCCCCGCCTTCGTTTTTGGTTCAGACGGCGATGAGGGTATCGAGAGCAAGATGGTTTACCTTCTTGAGAAGAGTGTTCCATTACCAAAATGGATCAAGGTCAAACCTTGGCTCTAATCCTTTCAATACTAGAACATGGATGATGATGGAGTTTATAGCTTTAGTGGTTCAGATAATCACTATAACATTCACTTTGGCTATTTCAAAAAAGGAGAGGCCTGTTTGGCCTATGAGGATTTGGTCAGCTGGTTATGATATTGGTTGTTTTCTTAATCTGCTTCTACTTTATGGCCGGTACCGGCAAATTTGTGCAACTCAAGGAGATGTTCTTAGCTTTTCTGATATTGAACAGCAGAGAAACAATGAAGAAACCAGTGTATACAGGATTTCCCATTTGATGAACAAGTGCAGGACTTCACTTGAGCTTTTCTTTGCAATTTGGCTCCTTGGCTACAACATGAACATGGGATCTTCGGACAAAGGAGCATCTGATGATCAAATCTCACAACTTCCAAGTTGGAGATACAAAGAATCACATACAAAGTTAGAGTTAGGCAACAAGGATTTCGAAGGCAGCGAGAAGTTGATCAACGAGGACTCACAATCAATCAATTATTCTTCATTACAATATTCTTTATTGGAAATGGCTCCTCCAACTAATAGGAAAAATTTGGATGCAATAGAAGTGAAAAAGCCTCCTAGGTTGAATATGGACAACAATGTCCATGATCTCAAGAACAAGAAGTCGCCATTGCCATTGCAAATGCCATCACCATCACCATCACCATTGGGACAATCTCCTCTGCCATCGCCATCACGATTAGGACAATCTCCTCTGCCATCAGCATCACCATTAGGACAAACTCCTGTGCCGGCCACCACGAAATCTTCTAGTGGAAAGTTTGAGTGTCTATGCTCACCAACCACACATGCTGGCTCCTTTAGGTGTAGGCACCACCGTGCCAAGGAGGCAGAGATGCGTCGCGCAATTGAGTTGCATTCCAAGACACCAAAGCCAAACAGAAACATATTCAGAACGCTTTTTCTCTTTTCCCCACGCTTTATAACTCTATTCCCCACACTTTTTTCTTCTAAGCTTCTCTCTAATTCGCCGATCGATCATCTTGCCTCCAAGTGGTTCCTCCAAATTAAGATATCTTGGCATTTGGATTGA 1314 0.4285 MNSRCFLPQESLFINSGSMASFSSNSAAAAAEDSRVNSTRNRPLPRASPPSFLVQTAMRVSRARWFTFLRRVFHYQNGSRSNLGSNPFNTRTWMMMEFIALVVQIITITFTLAISKKERPVWPMRIWSAGYDIGCFLNLLLLYGRYRQICATQGDVLSFSDIEQQRNNEETSVYRISHLMNKCRTSLELFFAIWLLGYNMNMGSSDKGASDDQISQLPSWRYKESHTKLELGNKDFEGSEKLINEDSQSINYSSLQYSLLEMAPPTNRKNLDAIEVKKPPRLNMDNNVHDLKNKKSPLPLQMPSPSPSPLGQSPLPSPSRLGQSPLPSASPLGQTPVPATTKSSSGKFECLCSPTTHAGSFRCRHHRAKEAEMRRAIELHSKTPKPNRNIFRTLFLFSPRFITLFPTLFSSKLLSNSPIDHLASKWFLQIKISWHLD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00140 437 MobiDBLite consensus disorder prediction 300 314 - -
Aip07g00140 437 MobiDBLite consensus disorder prediction 271 292 - -
Aip07g00140 437 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 25 195 - -
Aip07g00140 437 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 195 235 - -
Aip07g00140 437 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 25 195 - -
Aip07g00140 437 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 195 235 - -
Aip07g00140 437 MobiDBLite consensus disorder prediction 315 346 - -
Aip07g00140 437 MobiDBLite consensus disorder prediction 270 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00140 Aip-Chr7 1071554 1078731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00140 48 223 C3H Transcription Factor Family AT5G55970 54.506 5.50e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00140 - - aip:107609704 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00140 07 1071554 1078731 Aip07g00140 07 1071554 1078731 ECH