Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00136 ATGTCTAGAAGCTTAAGAAACCTCTCACTTTCTTCCAAAATTATCTCTTCCATAACATTGATTCTCTCAATAAACTCTCTTTTCTTCTTTTCATGTTGTTACTCTCTTGATGAACAAGGCAAAGCCCTTTTGGCATGGAAGAAAAGTTTGAATGGTAGTTCTAAAGATGCATTATTAGCATCTTGGGACCCTTCAAACCAAACACCATGCAATAACTGGTTTGGTGTGAAATGCAACTCAGAAAATGAAGTCATAGAGATAAACTTGAACTCAGTGAACTTGCAAGGTTCATTGCCTTCAAATCTTCAATCTCTTAAGTCCTTGAAGATTCTTGTCCTCTCATCAACCAACATCACAGGAAGAATCCCAAGAGAGTTTGGAGACTATCAAGAACTCATCTCAATTGATCTTAGTAGAAATTCTCTCTTTGGTGAAATACCAGAAGAGATTTGCAAGCTAAGAAAACTTGAGAGTTTAGGACTCCATGATAACTCTCTTGAAGGAAAGATTCCATTGAATATTGGAAACTTATCAAGCCTTGTGAACTTGACACTCTTTGATAACAAATTGAGTGGTGAAGTTCCAAAGAGCATTGGCTATTTGAGAAAGCTTCAAGTGTTCAGAGCTGGAGGGAACAAAAATCTCAAGGGAGAGCTTCCATTTGAGATTGGAAACTGCACTAACTTGATGATCTTAGGCCTAGCCGAAACCGGCATTTCCGGCAGTATTCCGGCATCAATAGGGATGCTGAAAAGGCTTCAAACCATTGCAATTTACACAACACTATTGTCAGGTTCTATTCCTGAAGGGATTGTGAACTGCAGTGAGTTGCAGAGTCTTTACTTGTACCAGAACTCTATTTCTGGTTCAATTCCAACTCAAATTGGAAAACTCAGCAAGCTTCAGAATCTACTCTTGTGGCAGAACAATATAGTTGGAACAATTCCTCAAAGTCTTGGAAGCTGCACAGAACTCAATGCCATAGATTTGTCACTGAATCTTCTCACAGGTAGCATACCAAAGAGTTTCGGAAAGCTATCAAATCTTCAAGTTCTTCAACTCAGTGTTAACCAGATTTCAGGTACTATACCTGAAGAAATCTCAAACTGCACTTCTCTGTATCAGATTGAAGTTGACAACAATGCTATTTCTGGGGAGATTCCTTCTCTTATTGGCAACTTGAGAAGCTTGACTCTGTTCTTTGCATGGAAGAACAAGCTAACTGGAACAATTCCAGATAGTCTTTCAGATTGCAAAGATCTTCAGGAGCTTGATCTTTCATACAACAGTTTGATTGGTCCAATACCGAAACAACTATTCGGATTAAAGAACCTCTCAAAGCTGCTGCTTCTTTCCAATGAATTCTCAGGCCTTATTCCACCTGATATTGGTAACTGCACAAGTTTATACAGGTTGAGGTTGAACCAGAACAAATTTTCAGGAACTATTGCATCTGAGATTACCAACTTGAAGAATCTGAACTTTCTTGATCTTGGAAGCAACCATCTTGTAGGGGAGATTCCTCAAGACCTTCACAGATGCCAAAAACTCGAGTTTCTTGATCTTCATTCCAATAGTCTCACAGGTTCAGTTCCATATATGCTTCCAACAAGCCTGCAATTCATTGATTTCTCAGATAATAGGCTAGAAGGTGAACTAAACCATTCCATTGGTTCACTAACTGAATTAACAAAAGTCAACTTGGGAAAGAATCTTCTCAGTGGAAGAATCCCTTCAGAGATTGCTTCTTGTTCTAAGCTGCAACTTCTAGACTTGGGAGGCAATGGCTTTTCAGGTGAAATTCCAAAGGAAATTGGTCAAATTCCTTCGCTCGAAATCGGCCTCAATCTCAGCTATAACCAGTTTTATGGTGAAATTCCAGCAGAATTCTCTGGCCTTAGCAAACTTGGAGTGCTTGATCTTTCACACAACAAGCTCTCAGGGAAATTAGATGCTTTTTCTGAGCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATCATTTCTCTGGTGAATTGCCTAACACTCCATTCTTCAGGAAGATTCCAATCAGTGATATCACTTCAAATGATGGTCTCTTCATTGCTGGTGCTGCTACACACAAAGTTCATGCAAGATTAGCTATGAAGATCATAATGTGCATTCTCTTGATCACAAGTGCAGGAGTAGCACTCTTCACAATCAGTTTCTTGATTCGTGCTTATATGGCCAACAAATCACTCATGAAAAGTGAAAATTGGGAGATAAATTTGTACCAGAAGTCTGAATTCTCATTCTCTATTGATGACATTGTCAAGAATCTGATATCAGCCAATGTGATTGGAACTGGAAGCTCTGGTGTTGTGTACAAGGTAGAGACTCGAAATGGTGAAACACTAGCAGTTAAGAAGATGTGGACATCATCATCAGAGTCCAATGGAGCATTCAGTTCAGAGATTAAGATACTAGGTTCAATCAGACACAAGAACATCATCAAGCTTCTTGGTTCTGGATCCGACAAGAACAAGAGCATGAATCTGCTGTTCTATGAGTACCTCCCTAATGGAAGCCTGAGTTCATTGCTTCACGGTTCAGGAAAAGGGAAAGCAGAATGGAAAACCAGATATGATATTGTGTTAGGCTTGGCTCATGCACTGGCATGTTTGCACCATGATTGTGTGCCTCCTATAATTCATGGAGATGTAAAAGCTATGAATGTGTTACTAGGCCATGGCTATCATCCTTATCTTGCTGACTTTGGTCATGCAAGAATTGTAGCTGAAAATGCTGACAAGCCAGTTCAAAGACACTACCTTACTGGTTCCTATGGATACATGGCTCCAGAGCATGCATTGATGCAGTGTATCACTGAGAAAAGTGATGTTTACAGTTTCGGAGTGGTGTTACTTGAGATCCTCACAGGAAGGCACCCTTTGGATCCAACTCTTCCTGAGGGTGCAAACTTGGTTCTTTGGGTCAAGAACCACTTGGCTAACAAAGGAGAACCATTTGAGATCATTGACACAAATCTTAGAGGGAGAATAAATGACCCTACTGTGCACCATGAGATGCTTCAAACTTTGGCAGTGTCATTTTTATGTATCAGCAACAAACCTTATGAACGTCCTACAATGAAGGACACTCTTGCAATGCTCAAGGAAATTAGACCCTTTGGTGAAGCCTCAGGGGAAGATCATCATGTGTTCAAGGGAGGTTTTTAA 3201 0.3989 MSRSLRNLSLSSKIISSITLILSINSLFFFSCCYSLDEQGKALLAWKKSLNGSSKDALLASWDPSNQTPCNNWFGVKCNSENEVIEINLNSVNLQGSLPSNLQSLKSLKILVLSSTNITGRIPREFGDYQELISIDLSRNSLFGEIPEEICKLRKLESLGLHDNSLEGKIPLNIGNLSSLVNLTLFDNKLSGEVPKSIGYLRKLQVFRAGGNKNLKGELPFEIGNCTNLMILGLAETGISGSIPASIGMLKRLQTIAIYTTLLSGSIPEGIVNCSELQSLYLYQNSISGSIPTQIGKLSKLQNLLLWQNNIVGTIPQSLGSCTELNAIDLSLNLLTGSIPKSFGKLSNLQVLQLSVNQISGTIPEEISNCTSLYQIEVDNNAISGEIPSLIGNLRSLTLFFAWKNKLTGTIPDSLSDCKDLQELDLSYNSLIGPIPKQLFGLKNLSKLLLLSNEFSGLIPPDIGNCTSLYRLRLNQNKFSGTIASEITNLKNLNFLDLGSNHLVGEIPQDLHRCQKLEFLDLHSNSLTGSVPYMLPTSLQFIDFSDNRLEGELNHSIGSLTELTKVNLGKNLLSGRIPSEIASCSKLQLLDLGGNGFSGEIPKEIGQIPSLEIGLNLSYNQFYGEIPAEFSGLSKLGVLDLSHNKLSGKLDAFSELQNLVSLNVSFNHFSGELPNTPFFRKIPISDITSNDGLFIAGAATHKVHARLAMKIIMCILLITSAGVALFTISFLIRAYMANKSLMKSENWEINLYQKSEFSFSIDDIVKNLISANVIGTGSSGVVYKVETRNGETLAVKKMWTSSSESNGAFSSEIKILGSIRHKNIIKLLGSGSDKNKSMNLLFYEYLPNGSLSSLLHGSGKGKAEWKTRYDIVLGLAHALACLHHDCVPPIIHGDVKAMNVLLGHGYHPYLADFGHARIVAENADKPVQRHYLTGSYGYMAPEHALMQCITEKSDVYSFGVVLLEILTGRHPLDPTLPEGANLVLWVKNHLANKGEPFEIIDTNLRGRINDPTVHHEMLQTLAVSFLCISNKPYERPTMKDTLAMLKEIRPFGEASGEDHHVFKGGF 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00136 1066 SUPERFAMILY RNI-like 316 669 - -
Aip07g00136 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Aip07g00136 1066 SUPERFAMILY RNI-like 86 408 - -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 614 701 IPR032675 -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 243 337 IPR032675 -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 537 613 IPR032675 -
Aip07g00136 1066 PRINTS Leucine-rich repeat signature 421 434 - -
Aip07g00136 1066 PRINTS Leucine-rich repeat signature 633 646 - -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 38 153 IPR032675 -
Aip07g00136 1066 SMART serkin_6 768 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00136 1066 Gene3D Phosphorylase Kinase; domain 1 732 845 - -
Aip07g00136 1066 Gene3D Transferase(Phosphotransferase) domain 1 846 1059 - -
Aip07g00136 1066 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Aip07g00136 1066 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1056 - -
Aip07g00136 1066 Pfam Leucine rich repeat 615 669 IPR001611 GO:0005515
Aip07g00136 1066 Pfam Leucine rich repeat 300 359 IPR001611 GO:0005515
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 435 536 IPR032675 -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 338 434 IPR032675 -
Aip07g00136 1066 Gene3D Ribonuclease Inhibitor 154 242 IPR032675 -
Aip07g00136 1066 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Aip07g00136 1066 SMART LRR_sd22_2 418 444 - -
Aip07g00136 1066 SMART LRR_sd22_2 536 562 - -
Aip07g00136 1066 SMART LRR_sd22_2 490 513 - -
Aip07g00136 1066 SMART LRR_sd22_2 346 369 - -
Aip07g00136 1066 SMART LRR_sd22_2 274 300 - -
Aip07g00136 1066 SMART LRR_sd22_2 633 658 - -
Aip07g00136 1066 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1056 - -
Aip07g00136 1066 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Aip07g00136 1066 ProSiteProfiles Protein kinase domain profile. 768 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00136 1066 Pfam Protein kinase domain 772 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00136 1066 SUPERFAMILY Protein kinase-like (PK-like) 758 1045 IPR011009 -
Aip07g00136 1066 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Aip07g00136 1066 SMART LRR_typ_2 656 680 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 560 584 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 633 655 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 298 322 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 346 370 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 153 177 IPR003591 -
Aip07g00136 1066 SMART LRR_typ_2 490 514 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00136 Aip-Chr7 1041603 1045244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00136 33 1065 Receptor kinase-like Gene Family AT5G56040 62.644 0.0 1260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip07g00136 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00136 - - gmx:100813139 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00136 07 1041603 1045244 Aip07g00136 07 1041603 1045244 ECH