Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00127 ATGAATATGAAGGATTCTGCATACAGAGTTGAAACGACTTGTCGTCTTGCACAATGGAGAATCGACAATTTAGCTTCATGCACTTATCGCAAATCCGATCCTTTCACCATAGCCATCTGGAACTGGCATTTATCTGTGGAGAGGAACAGAGTTTCTTGTGTTAAGTTGTTTCCAGAAGCAACGAACAATCTTCCACTTTCATCTTTCGTCATTCGCCTGCTTAGCTCTGTCAAAGATCGCAAGGCCTTGGCTCAATTAGAGGTAAGAGACAAATTGCTGAGCAGCAGAGAAGGATTTGTGTGGGGAATTGAGGTTCCACTTCCAGGGAGATTCATTATTCATGTTGAGTTTCTCGATTTGAAAACTTCATCTTCAAATGGAGAAGATATTTGTTCTATTTGGCCTAACAGAATTATGCAGCAAAGATCAAATTCAGCAGCTCTTGAATCTCTCAGTCGAATGTTAATGGAAGGAATGCACACTGACATAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCATCGCGCAGTTCTTGCTGCTCGATCGCCTGTGTTTCGTAGCATGTTCTCTCATGATCTTAAAGAGAATGATGATTCCACCATAAACATCTCAGACATGTCAACTGAATCTTGCCAAGCATTTATAAACTACCTTTATGGCATCATTGAACACCAAGAATTTCTAATGCATAGATTGGAACTTGTTCGTGCTGCAGATAAGTATGACATTTGTGATTTAAGAGATGTGTGTCATGAGAGCCTTGTAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGAATGCATATTTGTATGGATTGCCAAAGCTGAAGATTAGTTGCATGCAATATCTTGTGAAGTTTGGAAAGATATTTGACATTAGAGATGATTTCATTGTATTCTTGCAAACTGCAGATAGAGATTTGATCACTCAAATCTTTTATGAAGTTCTTAGTGTCTGGAATGGTTTTTGA 981 0.3884 MNMKDSAYRVETTCRLAQWRIDNLASCTYRKSDPFTIAIWNWHLSVERNRVSCVKLFPEATNNLPLSSFVIRLLSSVKDRKALAQLEVRDKLLSSREGFVWGIEVPLPGRFIIHVEFLDLKTSSSNGEDICSIWPNRIMQQRSNSAALESLSRMLMEGMHTDITINASDGSIGAHRAVLAARSPVFRSMFSHDLKENDDSTINISDMSTESCQAFINYLYGIIEHQEFLMHRLELVRAADKYDICDLRDVCHESLVEDIDSSNVLERLQNAYLYGLPKLKISCMQYLVKFGKIFDIRDDFIVFLQTADRDLITQIFYEVLSVWNGF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00127 326 Gene3D Potassium Channel Kv1.1; Chain A 136 289 IPR011333 -
Aip07g00127 326 SUPERFAMILY POZ domain 144 257 IPR011333 -
Aip07g00127 326 PANTHER OS08G0495500 PROTEIN 3 326 - -
Aip07g00127 326 PANTHER OS08G0495500 PROTEIN-RELATED 3 326 IPR044714 -
Aip07g00127 326 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Aip07g00127 326 Pfam BTB/POZ domain 156 257 IPR000210 GO:0005515
Aip07g00127 326 SMART BTB_4 161 259 IPR000210 GO:0005515
Aip07g00127 326 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00127 Aip-Chr7 990732 992439 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip07g00127 BTB 4.2e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00127 K10523 - gmx:100790186 482.641