Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00108 ATGATGGATTGCATTTCTGGTTTTGCCTCTTCCATTTCAAGAGATTTGGTGGTAGGAACAACAAATCAATTGCGCTATCCTTGTTGCTTCAATGATTTCATTGAAGACCTTGAACAAGAGGAAGAAAAGTTAATCACAACAAGGAACAGTGTTGAAGACCGAGTTAAACATGCCAGAAAACAAGTAATAAAGAATGCTGAAGTTGTGAATGCATGGTTGGAGAAATCTAACCCTCTCAAAGATAAAGCAGAGGAGTTAATAAGAAAAGCAAGAACAAACAGGAGTTGTTGTTTTGGCTACTGTCCAAATTGGATTTGGAAGTATCATCTAGCCAAGAAGTTAGCAAAAAGAAGAAAGGAAGTTGAAATGTGTGTTCAAGAAGGTAAAATGTATATACAATATGAAAGGATTGCTTCACTTCCAAGCAAGCAACATTTCTTGGAAAATTGTTTGAAGTTTGATAGCAGAGAAGGTGACTATGAGGAGCTTCTAGAGGCACTAAAAGATGATGAGGTTACTACTATTGGATTGTATGGCATGGGAGGTTGTGGTAAAACCACCATGGCTATGGAACTTATGAGGACTGCAGAAGCTGAGAATCTATTTGATAAGGTGCTTTTTGTGTCTGTGTCTAATATAGTAGATGTCAGGAAGATTCAAGATAGAATTGCCAGTGCTTTGCAGTTTCAGTTTCCAGAAGGAGGAGAATCGGAGAGAGCACAGCGCTTGCGCGCGAGATTGAATCTTGATGACCAGAGAACTCTTGTCATTCTAGATGATTTATGGCAATCACTTGATTTTGGTGTTATAGGAATTCCATCAGGTCAAAACCATAGAAACTGCAAGGTTCTCATCACTACACAATATGAAACAGTTTGTAGTCTGATGAATTGTCAAAGAATGATTTACTTATCAACCTTAACTGATGAAGAAGCGTGGGAGCTTTTCCAGAATCAAGCACAACTATCTGGAAGCACTTCGGATAACTTGAAGCATCTGGGAAGACTGATTTCAGATGAATGCAAAGGATTGCCTGTTGCTATTGCTGCTCTGGCTAGCACTTTGAAAGGCAAGGCTGAAGATGATTGGAATGTTGCATTGGTTAGATTGAGGAATTCAATTCCGGTGAATATTGAGAGAGGTCTGAAAGATCCTTATAAATGCTTCAGAGTAAGCTATGACAACTTGGATACCAAAGAAGCCAAGTCACTTTTCTTGTTGTGTTCTGTGTTCCCTGAAGGTTATGAAATCCCAGTTGAAACTCTAATTAGATTTGCAATAGGACTTGGCATGGTTGGAGAAGTTTGGTCATATGAGGAGGCAAGGAATGAAGTATGTGCAGCTAAGAACAAACTCATAAGTTCTTGTTTGCTATCAGATATTGGAGGAGGAAAGCGTGTCAAGATGCATGATTTGGTTCGCGACGTAGCCCTTTGCATTGCAAACAATGACAACAAGGTGATCAAGTGTGTGTTAGAAAATAGTGCAATTTTGGAATCCAGATCAATAAGGTATCTGTTGTGTAAGGAGTTTCCAAGTGAACTAAACTGTTCAAGTATTGAACTTCTATGCTTAGAAACAAATTCAGAAGTATCAGATGAAATGTTCAGAACAATGGGAAGGCTTCAAGTTTTGTTTCTTAGCTGCAAAGGCCTTGGTACTAGCTCATTATCAACCATGTCGTTTAAGTGGTTGATAAACCTTCGTTGTTTATGGCTGAAGATGTGGAAATTAGGTGACATCTCTTCCATGGGATATATGACAAAGCTCGAAAGCCTTACGCTGCTTGGTTGTTCATTCTTGGAGTTAACTGAAGATGTAATGGCACAACTAACAAAATTGAGGCTGCTACATTTGTCAGAATGCAAAATGGAGAGAAATCCTTTTCAAGTAATCGGAAGAAGGCCATCATTGGAAGAACTTTACATTGATGGTGAGACATCTAAATGGGACAATGGTAATGGAGGCCAAACTGAATTCTTCAGAAATTTTAGAGTCCCTCAAGCATTGGCAAGGTACCATATACAACTAGGACACAAATTTAAGGGTCATGGAGATAAAATCCTTAGCTGTCGTAGAACCTTAATTCTTAGCTGTTTTGATACATCAAATGCATCAGCTGTGGCTTTGGCAGAGAAAGCAGAGGTTCTGCTTCTAGCAAATATTGTTGGAGGTGCACAAAATATCACACCTGATATATTCCAAATTGAAAGAGAAGGATTTATGGATTATGGCTGTATTCAGCTTTGGTTATGTGATTCTGATGAGATCAAGTGTTTGGTTGAAAACAGCAATCATCCCCAACAAAGGCTGAGAAATATGTTCTCCAGGTTGCGGCAACTAAGACTCGAAAGAATGAAGAATTTTGGAGCTTTATATCATGGTGTGCCTCCTATTGGCCTTTTTGAGAAGCTAGAGCATCTATATATAAGCAAATGTCCACTGAAAACATGTCTCTTCACACCTGCGATTGCTCGAGGTCTGCAACAGTTGGAAAAGCTAGAGATATTTTCATGTGATGAACTGAAGCATATACTTGAAGATGAGGAGATAAGTGGACAGGACCATAGGGTGATCTTCTCAAAATTGAAAAAACTTCATATTATGGGGTGCCAAATGCTAGAATATGTAATCCCAGTTACTTTTTCTCAAGGCCTTGTGCAATTGGAGTCTTTGGATATAGATTATTGTGGTGAGTTGAAATATGTGTTTGGAGAATGCAGCACAGATGGTGATACAAGTCATCAAAATGGAATCAACATCGAGTTTCCTGCGCTTCAGGTGCTTCGACTTACTGATAATTGGAACATGATTGGCATTTTCCCCCAGTGTTACAGTGCAGAGTGGCCATCTCTGCATAAGTTTTATTTGGAATATTGTCCAAAGCTTAAGATAATGTCCATCAATACTTTCAAGGCTAATGAATGCAAGGACACAGTGGCCATTGAGAAGGACTTCCTCTCTTGGGAAACCATATGTATACACAAGTCCAAAGTAGAAACTATTTTTAGCCTCGAACAGGCCGAGATCATTGAGCAACCGGTGAGATTACAGTTAAGACATCTAGAACTTTCGCATCTACGTCAGATGAAGTATATTTGTGTAGGTTTGAAAAACTTTTTTGTCTTCCAAAATCTAAAGACATTAGAGATCAAAAGATGTGAAAAGTTGGAGGTAACCTTTCCTGCTTCTGTTATGAGATGCCTTCCAGAATTGAAGCATCTAAAGATTATAAAATGCCGGGAACTGAAGTTGATCATTGAAGAGGGTGATGCAGAGAATCACAGATTATCAAATTGTGTTCCTCCACAGCCATGCTTCCCAAAGCTGTCTGAACTGATTATTACAGACTGCCAGAACTTGGAAAGTTTATTCCTTGTCTCCGAATCGAATGACCTTCCCAATCTAGAAGTTCTCATCATAGTTGGAGCTGGTAAGCTAAAAGAATTGATCAGATGTGAAGAAAGACAAAGTGATCAAATAAGAAACGTGCAAGTTAAGCTTCCAAAGCTTAAACTTCTAATGCTGATGTCCATGTCTAATCTTTGCCAAGAAATTGAACTGCCCTCTGCAGCACTTTGTGTCATCGATGAATGTCCAAAATTCCCTCTGACTTCATCGGTTGCTACCTTCAAGGAGTTTGAACGAAAAATCTCTGAATTGGATATAGATCTGGAGGATCTGGAAATAGCTGGAATTGACCAATGGAAAGTACTCGACAGGGTTCGCGAGATTAATAAATCGGATCAGATTGAAGAAGAAGAAGCAGAGATCAAAATTGTTGGAAAATCTTCTTATTTTGATATACCATCTACATCTACAAGTCCCTTGGACATTGCTGTACATAAAGCACACTCACATAGTATTGAAGGAATAGAGAAAACCTGTGTTGGAGAAGTTCCAGCATCACTGAAGCCAATATCACCAATTTTTGGTTCAGAAGTAGTAGCAAAACCTCTATATAAAATACCCTCTATTAATGTTGAGGACAAGATTAAAGAAGGCCAAAAAATGCAGGATGTTAAAGATAGTATCCAAGAGCAAGAGCAACCTCACTTATCAGATAAGCAAGTTGTCTCTAATAGCAATATTGAGGTTCATGGAGATTCGTCGATGATAACGAAATTGGAAGCATTTAAGCAGTGTTCTGATCTTGATGATGCACAAATTGCACTGCTTGCTGAGGCAATAGCTGTGTATCCTCATCTTTGGAAAGTTGTTGAGGATTTCAGCATGCGCTTTCAAGCTTGGATGTTGAAGACTTTGGTAGATATATTATTCTTCCTTCGGAACGAATCTCCGGCCAGTGTTACTCCTCAACGGAAGAAGGACTTCCAGAAACTCTGTGATGAAGCTATTCAGTTGGGATTTGACAAGTCATGGATTCATGAAATGCATCAACGTGTTATGGTTATGGTTAAGGATACTAATAAGGTGGATCATGCACAAGAACAACTTGGTGAGCTTCTTAAGAAGCATGATCATCTAACTGAGCAACTTCAAAGCATTAAGGCTGAAATTTTGCCTAAAGTGGTGATTTGGGGAACTTTGATTTGGGAAATGAACAAGGGACAGTCACCGGAGCCTCTAGATTTCTTCATCTGGACTGTTGAGGATGTTGGCTTGTGGCTGGAGACTATAAATCTTGGCAGTTACCGCCAAACTTTTAAAGAACATGGTGTTAATGGCGAATACTTGGAAGGAATGTCTATGTTCACAACTGAGCAGATCCTTCGTTTCATAAGACGCTGCCACATGAGGTGGGGAGACTTCATTACATTGTGCAAGGAATTGAGACGGATTAAAGTGGCTTGTCTGAAAGGGGAGCAAAAGGTGCGGCGGCCGTGGTGGGCACCGGCATGCCTATCCACAGTGTTCTTAAAAGTTGCAAAATCCAACAGACAATCAAGAGTGGTTTCTTTGAAGCTGGAGCCATAG 4938 0.3951 MMDCISGFASSISRDLVVGTTNQLRYPCCFNDFIEDLEQEEEKLITTRNSVEDRVKHARKQVIKNAEVVNAWLEKSNPLKDKAEELIRKARTNRSCCFGYCPNWIWKYHLAKKLAKRRKEVEMCVQEGKMYIQYERIASLPSKQHFLENCLKFDSREGDYEELLEALKDDEVTTIGLYGMGGCGKTTMAMELMRTAEAENLFDKVLFVSVSNIVDVRKIQDRIASALQFQFPEGGESERAQRLRARLNLDDQRTLVILDDLWQSLDFGVIGIPSGQNHRNCKVLITTQYETVCSLMNCQRMIYLSTLTDEEAWELFQNQAQLSGSTSDNLKHLGRLISDECKGLPVAIAALASTLKGKAEDDWNVALVRLRNSIPVNIERGLKDPYKCFRVSYDNLDTKEAKSLFLLCSVFPEGYEIPVETLIRFAIGLGMVGEVWSYEEARNEVCAAKNKLISSCLLSDIGGGKRVKMHDLVRDVALCIANNDNKVIKCVLENSAILESRSIRYLLCKEFPSELNCSSIELLCLETNSEVSDEMFRTMGRLQVLFLSCKGLGTSSLSTMSFKWLINLRCLWLKMWKLGDISSMGYMTKLESLTLLGCSFLELTEDVMAQLTKLRLLHLSECKMERNPFQVIGRRPSLEELYIDGETSKWDNGNGGQTEFFRNFRVPQALARYHIQLGHKFKGHGDKILSCRRTLILSCFDTSNASAVALAEKAEVLLLANIVGGAQNITPDIFQIEREGFMDYGCIQLWLCDSDEIKCLVENSNHPQQRLRNMFSRLRQLRLERMKNFGALYHGVPPIGLFEKLEHLYISKCPLKTCLFTPAIARGLQQLEKLEIFSCDELKHILEDEEISGQDHRVIFSKLKKLHIMGCQMLEYVIPVTFSQGLVQLESLDIDYCGELKYVFGECSTDGDTSHQNGINIEFPALQVLRLTDNWNMIGIFPQCYSAEWPSLHKFYLEYCPKLKIMSINTFKANECKDTVAIEKDFLSWETICIHKSKVETIFSLEQAEIIEQPVRLQLRHLELSHLRQMKYICVGLKNFFVFQNLKTLEIKRCEKLEVTFPASVMRCLPELKHLKIIKCRELKLIIEEGDAENHRLSNCVPPQPCFPKLSELIITDCQNLESLFLVSESNDLPNLEVLIIVGAGKLKELIRCEERQSDQIRNVQVKLPKLKLLMLMSMSNLCQEIELPSAALCVIDECPKFPLTSSVATFKEFERKISELDIDLEDLEIAGIDQWKVLDRVREINKSDQIEEEEAEIKIVGKSSYFDIPSTSTSPLDIAVHKAHSHSIEGIEKTCVGEVPASLKPISPIFGSEVVAKPLYKIPSINVEDKIKEGQKMQDVKDSIQEQEQPHLSDKQVVSNSNIEVHGDSSMITKLEAFKQCSDLDDAQIALLAEAIAVYPHLWKVVEDFSMRFQAWMLKTLVDILFFLRNESPASVTPQRKKDFQKLCDEAIQLGFDKSWIHEMHQRVMVMVKDTNKVDHAQEQLGELLKKHDHLTEQLQSIKAEILPKVVIWGTLIWEMNKGQSPEPLDFFIWTVEDVGLWLETINLGSYRQTFKEHGVNGEYLEGMSMFTTEQILRFIRRCHMRWGDFITLCKELRRIKVACLKGEQKVRRPWWAPACLSTVFLKVAKSNRQSRVVSLKLEP 1645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00108 1645 Gene3D Ribonuclease Inhibitor 922 1209 IPR032675 -
Aip07g00108 1645 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1016 1201 - -
Aip07g00108 1645 Pfam SAM domain (Sterile alpha motif) 1535 1571 IPR001660 GO:0005515
Aip07g00108 1645 PANTHER - 24 966 - -
Aip07g00108 1645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 408 IPR027417 -
Aip07g00108 1645 Pfam NB-ARC domain 157 387 IPR002182 GO:0043531
Aip07g00108 1645 SUPERFAMILY RNI-like 1018 1184 - -
Aip07g00108 1645 CDD AAA 156 289 - -
Aip07g00108 1645 PANTHER - 1016 1201 - -
Aip07g00108 1645 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 24 966 - -
Aip07g00108 1645 SUPERFAMILY SAM/Pointed domain 1526 1605 IPR013761 -
Aip07g00108 1645 PRINTS Disease resistance protein signature 248 262 - -
Aip07g00108 1645 PRINTS Disease resistance protein signature 174 189 - -
Aip07g00108 1645 PRINTS Disease resistance protein signature 609 625 - -
Aip07g00108 1645 PRINTS Disease resistance protein signature 341 355 - -
Aip07g00108 1645 Coils Coil 1479 1506 - -
Aip07g00108 1645 Gene3D - 393 475 IPR036388 -
Aip07g00108 1645 Gene3D Ribonuclease Inhibitor 476 668 IPR032675 -
Aip07g00108 1645 Gene3D - 141 304 IPR027417 -
Aip07g00108 1645 Gene3D - 1534 1600 IPR013761 -
Aip07g00108 1645 SMART AAA_5 171 326 IPR003593 -
Aip07g00108 1645 ProSiteProfiles SAM domain profile. 1535 1570 IPR001660 GO:0005515
Aip07g00108 1645 SUPERFAMILY L domain-like 454 969 - -
Aip07g00108 1645 Gene3D - 306 392 IPR042197 -
Aip07g00108 1645 Coils Coil 34 54 - -
Aip07g00108 1645 Gene3D Ribonuclease Inhibitor 747 917 IPR032675 -
Aip07g00108 1645 Coils Coil 1211 1231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00108 Aip-Chr7 816377 832509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00108 156 507 WRKY Transcription Factor Family AT5G45050 26.146 1.03e-13 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00108 - - adu:107496081 2791.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00108 07 816377 832509 Aip07g00108 07 816377 832509 ECH