Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00106 ATGTCTGGTGATGATGATGTTGTTGTTGGTGCCAACATTAATAATCTTGGTGCTAGCTTACTCATAACTAGCAGCAGGTACATCAAGATTTGGCATAGAACCACCAAATACATTGGAATTCTCATTTATCTCAAGAAATCAACACCATACACTGCATTGCCTCCTGCTAGATCCAAATCATACCATGAAATTGAGATTGCCTCTGATGATGATCAAGAGGAGAAAGTAGAGCATGATGGCCCTCTTTGTTCACCACTTTCTGATCAACACACTGAGGAGGGCCTTATTGGCAATGGGAACTATAAGGTGTTGCCAGGGCATGATGGAACAAGCTTCACCAAGTGTTTGTGGAATTGCTTCAAACGCAACAATTATGCAATTTCAGTGCTGTTATGCTCAGCTGGTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCTAAATATGGTTGGCATGATGGTGTTGCCATAGTAATTGCTGTTATCCTGATTGTTGCATTCCCTTCCATAACAAACTATTGGAGCGAAAGGAAGATGATGAAACTGTCAAAGAGAAAGGAGAAAATGATATTCACAGTTGAAAGGGAGGGCTTGTTGGAGAGGCGAATCGAGAAACCAATCTGTTACATTGACAAATTTGTTCTTTTGGTCTCAGTATCCGTTGCTCTTGTGGTGCTTATTCGCCTGATCTGCAAATCGAATGGGGACAGTGGTGATTTGCCAGAGCTTAAGGGGAATGTCTCAGTTGGTTTGGTGATGGAAGTTCTTCAGAGAACCTTTTTGAGGCCATATGGAAGGATTTCCATCTTAGCAGGTCTTGTTACTGTTGTAGTACTATGTGTGCAACATGGAGTGCCACTTATGGTTACAGTTTCTCTCTATTACCAGAAGGTAGTGTCCAGAAAAGATGCAGTCATAAATGGTTTATCAGCTTGTACAACAATGGGGCTAGTTACTGTCATCTGCATTGATGTATCTGGTGGATTGACATCCGAGCTGATGAAGGTTAGCAGAGTTTGGATGGGGGAGAAAGATATTAGCAAGGTTGAGGAATCAGAAGTTAATCAAGTTGTTCTCAGTATGCTTCAACAAGGAGTTGTTTTATCTGTGGCACCAGAGCTTCAGCTTTCTCCAATATCAAGTTCACTTATTTCATGGGCTGAAACAACATCGGGAATGAATAGAGAGTATTTTACAACAAAATTTGACACTCTAAAGCACAGAAAACTGGATTCTGACAAAGAAGGCAGTGGAGTTTTGTTGAAAAATGTTGGGGAGAATGATCAAAATCTGCACTTGCACTGGAGCGGTGATGCATCCACGGTATTGGATATGTGTTCACTATACTATGATAGCAAAGGGGAATGCCACACCATAGGGAATCAGAAAATCAAATTTGAAGAAGTGATTAAGGAGATGGAAAATAGTGGTCTGAAGCCAATTGCATTTGCTCATAAACAAACTACGGTGCAAGAACTTGAACAAGATGAATTGATATTGTTAGGATTGATGGGTCTCGAAGGAACATGTCAAGAATCCAGAAAACTAGCAATGGAAGAGCTCAGAGAAGCTGGATTAAAGATCATACTGGTCTCAGAGGATGCAATTCTGGTAGTGAATGACATAGCTCAGGAACTAGGATTTGAATTGACAGTAGATGACATTTTCCTTGAAGGAAAAGTACTTCAAGATTTGAATGGAAGTGCTAGATTGGATAAGGTGGACCTGGCCCTTATAATGGGAAGTTTTTGCCTTGAAGACAAGATTCTCATGGTACAGTGCTTTCAAGAAAAGGGTCATGTGGTTGCATTTGTTGGAAAAGGGACAAGTAGCCATAGTTCAGTTCTGCAAGTAGCTGATGTAGGCATAATCCATGATTCTCTAGGCACAGTAGTGGACACAGATAGTTCTGGAATAACCATCAGATGTTTCAATGCATTGAAACCAATTGTTATGGCTGGTAGAAATAACTACAGAAACATTCAGAAGTTCATTCAACTTCAACTCACCTTTAGCATATCAGGTTCACTCATAACCTTGATTACTACAATCTCCACAGGAGAATCACCCTTAACAGCATTCCAATTTATTTGGGTGAATTTTGTAATGTGCCTTCTTGGTGGCCTAATGATGATAATGGAGTTGAGTTGTGAGGAAAAGCTTCTTGCTATTCAATCATCAAGAAGGAGTCAATCAGTTATAACAAGAGAGATCTTGAAGAGCATAGCTGTTCAGGTTTTGTACCAGACTTGGGTATCGATGATGCTCAAATTCAGTGGCCATAGAACTAATGAAGAGAAAGAAGTTAGGAAAACCATGATCTTCAACTCATTCCTATTTTGCCAGGTGCTGATGATTGAGTATGCAAAATGCCTAGCATATTGCATGAGGCTGAATGTTCCACACTGGGCTATCTGTGTCCTTGTTGGTTTCTCTTCATGTGCATTTGAATGGATCCTGAAGAATCTAGTAGTGATTCTTAGCACCAATAATGCTTCAGAAACAAATTGA 2511 0.4038 MSGDDDVVVGANINNLGASLLITSSRYIKIWHRTTKYIGILIYLKKSTPYTALPPARSKSYHEIEIASDDDQEEKVEHDGPLCSPLSDQHTEEGLIGNGNYKVLPGHDGTSFTKCLWNCFKRNNYAISVLLCSAGLSFATEFKQEGPKYGWHDGVAIVIAVILIVAFPSITNYWSERKMMKLSKRKEKMIFTVEREGLLERRIEKPICYIDKFVLLVSVSVALVVLIRLICKSNGDSGDLPELKGNVSVGLVMEVLQRTFLRPYGRISILAGLVTVVVLCVQHGVPLMVTVSLYYQKVVSRKDAVINGLSACTTMGLVTVICIDVSGGLTSELMKVSRVWMGEKDISKVEESEVNQVVLSMLQQGVVLSVAPELQLSPISSSLISWAETTSGMNREYFTTKFDTLKHRKLDSDKEGSGVLLKNVGENDQNLHLHWSGDASTVLDMCSLYYDSKGECHTIGNQKIKFEEVIKEMENSGLKPIAFAHKQTTVQELEQDELILLGLMGLEGTCQESRKLAMEELREAGLKIILVSEDAILVVNDIAQELGFELTVDDIFLEGKVLQDLNGSARLDKVDLALIMGSFCLEDKILMVQCFQEKGHVVAFVGKGTSSHSSVLQVADVGIIHDSLGTVVDTDSSGITIRCFNALKPIVMAGRNNYRNIQKFIQLQLTFSISGSLITLITTISTGESPLTAFQFIWVNFVMCLLGGLMMIMELSCEEKLLAIQSSRRSQSVITREILKSIAVQVLYQTWVSMMLKFSGHRTNEEKEVRKTMIFNSFLFCQVLMIEYAKCLAYCMRLNVPHWAICVLVGFSSCAFEWILKNLVVILSTNNASETN 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00106 836 Gene3D - 122 336 - -
Aip07g00106 836 Gene3D - 503 646 IPR023214 -
Aip07g00106 836 Gene3D - 647 786 - -
Aip07g00106 836 PANTHER CATION-TRANSPORTING ATPASE PLANT 193 784 - -
Aip07g00106 836 PANTHER CATION TRANSPORTING ATPASE 108 187 - -
Aip07g00106 836 PANTHER CATION TRANSPORTING ATPASE 782 831 - -
Aip07g00106 836 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 329 506 IPR023299 GO:0000166
Aip07g00106 836 Pfam Cation transporting ATPase, C-terminus 689 784 IPR006068 -
Aip07g00106 836 PANTHER CATION-TRANSPORTING ATPASE PLANT 108 187 - -
Aip07g00106 836 PANTHER CATION-TRANSPORTING ATPASE PLANT 782 831 - -
Aip07g00106 836 SUPERFAMILY HAD-like 320 707 IPR036412 -
Aip07g00106 836 Gene3D - 337 502 IPR023299 GO:0000166
Aip07g00106 836 PANTHER CATION TRANSPORTING ATPASE 193 784 - -
Aip07g00106 836 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 824 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00106 Aip-Chr7 804613 808266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00106 283 807 Primary Pumps ATPases AT3G63380 34.536 1.20e-90 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00106 K01537 - gmx:102661547 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00106 07 804613 808266 Aip07g00106 07 804613 808266 ECH