Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g00098 | ATGTCTGTGAATAAAAGAATTTCAGGATCAAATGGGAGGTTGCAACCAAGCATGAAGTCATGGAAGGTCAATGAGCCTCTAAATGGGTCTAATTCTCCTCATAGGACAACATGGAGGAGGAAGCCCTTGCTCCTTTTGATTGTTTTTGGTGTTATCATAGCAAGTTTCGGGTTTTTCTTGAGTTTCAAGAATAGTGAGTATTTGATGAGCAAGGAGAAAGAAGCTGCTTGTGAAGAGAGTTCAAGAATCTTGCTACAAAGATACAACATTAGCAGGAAGCAGCTTCATGCTTTGGCTTCCCTATTATCTGGATCAGATCAGAACATGTTGCAGTCATGGGAACTGCATGTCTCTGCAATTATGGACTATACAAGTTCATTAAATTTGGTTAAAGAGTACTGGTGGGTCCTTGTAGGAATTATAATATCATGCAATTTGTCTGGATTCTGTTTACTAAGAATTCAAAAGCAGAAGCTAGTTGAGGGACATCAAGTTAGTCATCAAAAGCAGCTGCGAGATTTATCCCGGAACCCTTTAAAGAGTGTTGGGACTTGGAGGAAATGGTCGCTAGCTATATTCTTGTCACTTGGAATACTTTTTTCCATTTGGTTATTCTGTGACTTATACACCGACTTTAAGCAGACAAGAGAAGAAATGCTTACCAATATGTGTGATGAGCGTGCCCGTATGCTTCAAGATCAGTTTAATGTCAGCATGAACCATGTTCATGCTCTGGCTGTTCTTGTTTCTACATTTCACCATGGTAAACATCCATCTGCAATGGACCAGACAATTTTTGGAGAATATACTGAGACTACTGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTAAGAAAGTTCTCCACTCTGATAGGGTGGAGTTTGAGAAGCAGCACGGGTGGACTATTAAGAAAATGGAAACTGAGAATGAAGCACTAGTCCAAGATTGTATTCCAGAAAAATTGGATCCGGCGCCCATTCAGGATGAATATGCACCAGTGATTTTTGCTCAAGAAACGGTTTCTCATATTGTGTCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATCTTGCGAGCAAGGGCAACAGGAAAGGGGGTTCTGACATCCCCTTTTAAACTTCTAAAATCAAATCACCTTGGTGTTGTACTTACATTTGCTGTTTATAACAGCAATGTTCCTGCAGATGCTACACCAGAGCAGCGAATCGAAGCTACTGTGGGGTACCTGGGTGCATCATATGATGTTCGATCACTGGTGGACAAGCTTCTCCACCAACTTGCAAGCAAGCAAATAATTGTTGTAAATGTTTATGATACAACCAACGCATCTGCACCGATCACAATGTATGGTACTGATGTTGCTGATACTGGACTACTACGTATAAACAGTCTAGATTTTGGGGATCCACTTCGAAAACATGAAATGCACTGCAGGTTCAAGCAGAGGCCTCCTCTACCTTGGAAAGCAATCAATTACTCGGTTGGCATATTTCTCATCGTTTTGCTTATTGGTTATATATATTATGTAGCCATAAAACGAATAGAAAAGGTGGAGGATGACACTCAAAAAATGGAGGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTTGCAAAATCTCAGTTTCTTGCAACAGTTTCTCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAACTTGATGAAAATCAGATGGATTATGCCCAAACTGCGCATAAGAGTGGTAAGGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGCAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACATGCTATTCTAGAGGAAGTTCTATCACTTTTCTCGGGAAAAGCTAAAGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATGAAGTACCCAAAGTTGTCATTGGCGATCCTAAACGGTTCTGGCAAATAATTACCAATCTTGTTGGCAATTCACTCAAGTTCACTCATGATAAAGGACATGTGTTTGTCTCTGTTCATCTGGCAAATGAAGTGAAGAACCCACTTCATGGCATGGATGCAGTGCTGAGGGAAGGCTTAAAATTGGATCATGATTTGTCAGACAATACATATAATACATTAAGTGGGTTCGCTGTAGGAAACCGATGGAAAAGTTGGGCCAACTTTAAAAAGTTAAATAGTATGGATTTGATGGAAGAGCCTGAATTGATTCAGTTACTAGTAACAGTTGAGGATACAGGTATAGGAATTCCTATTGATGCGCAAAGCCGTATATTCACACGTTTTATGCAGGCCGATAGTTCGACCTCTCGAACATATGGTGGAACTGGAATAGGACTGAGCATTAGTAAATGTCTTGTTGAGCTCATGGGAGGAGAAATTGGTTTTGTTAGTGAGCCTGGAACTGGCAGTACTTTTACATTTACTGCAACTTTCAGAAAAGGAGAAACCACATCTTTGGATGCAAAGTGGCAGAATTTCAGTACATTTGATTCACAGTTGCAAGGGTTGAGAGCATTAGTGGTAGATAGAAGAAAAATTCGAGCTGAGGTCACAAGATATTATCTACAGAGGTTGGGGATGTCGGTGGATGTTATGTCAAGTTTGAAATCTGCATGTTCTTGTCTAACTGGTTCTTGCAACATGAGAGTGTCGAAGCAGTTTGCGATGATTCTGATAGACAAGGATGCTTGGGATAAGGAAAGTAGCACCTTATACTCCATCAAGAAACAGAAAAAGAATGGCATCAATGGAGACCGAATAAACTTTCCAAAAGTTTTTCTCCTGGCCACACACCTTAGCCCGAACGAATGTGATGAGCTCAAGACAAATGGTGTCATTGATGATATATTAATGAAGCCTTTTTGGCTCAGTGTTTTGGTTTGCTCCTATAGAGAATCCCTTGGAATTGAAAAAAGGCAAATAAATAGGAAGAAAGTATCCAAACTTGGGAATCTATTATTACAGAAAAGAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAAAGTTGCAGAAGGTGTTTTACAGAAATATGGGGCAACAGTTACTTGTGTTGAGGGTGGCAGGGCTGCTCTACAGATGCTTAAGCCACCGCACAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGTGACAAGGCAAATCCGCATCCTAGAGAACGACGTAAATGAGAAAATTGCATGTGGGGAAGCATCAGCTGAAATGTTTGGGGATATCTTTTACTGGCACATTCCAATACTAGCAATGACAGCTGATGTAACTCAGGCTTCAAATGAAGAGTGCAAAAAGTGTGGGATGGATGGCTATGTGTCAAAGCCGTTCGAGGAAGAGCAGCTCTACACGGCCATGGCGCGCTTCTTCAAGCCTAGTTCATAG | 3435 | 0.4082 | MSVNKRISGSNGRLQPSMKSWKVNEPLNGSNSPHRTTWRRKPLLLLIVFGVIIASFGFFLSFKNSEYLMSKEKEAACEESSRILLQRYNISRKQLHALASLLSGSDQNMLQSWELHVSAIMDYTSSLNLVKEYWWVLVGIIISCNLSGFCLLRIQKQKLVEGHQVSHQKQLRDLSRNPLKSVGTWRKWSLAIFLSLGILFSIWLFCDLYTDFKQTREEMLTNMCDERARMLQDQFNVSMNHVHALAVLVSTFHHGKHPSAMDQTIFGEYTETTAFERPLTSGVAYAKKVLHSDRVEFEKQHGWTIKKMETENEALVQDCIPEKLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNSNVPADATPEQRIEATVGYLGASYDVRSLVDKLLHQLASKQIIVVNVYDTTNASAPITMYGTDVADTGLLRINSLDFGDPLRKHEMHCRFKQRPPLPWKAINYSVGIFLIVLLIGYIYYVAIKRIEKVEDDTQKMEELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDYAQTAHKSGKDLISVINEVLDQAKIEAGKLELEAVAFDPHAILEEVLSLFSGKAKEKGIELAVYASNEVPKVVIGDPKRFWQIITNLVGNSLKFTHDKGHVFVSVHLANEVKNPLHGMDAVLREGLKLDHDLSDNTYNTLSGFAVGNRWKSWANFKKLNSMDLMEEPELIQLLVTVEDTGIGIPIDAQSRIFTRFMQADSSTSRTYGGTGIGLSISKCLVELMGGEIGFVSEPGTGSTFTFTATFRKGETTSLDAKWQNFSTFDSQLQGLRALVVDRRKIRAEVTRYYLQRLGMSVDVMSSLKSACSCLTGSCNMRVSKQFAMILIDKDAWDKESSTLYSIKKQKKNGINGDRINFPKVFLLATHLSPNECDELKTNGVIDDILMKPFWLSVLVCSYRESLGIEKRQINRKKVSKLGNLLLQKRILVVDDNAVNRKVAEGVLQKYGATVTCVEGGRAALQMLKPPHNFDACFMDLQMPEMDGFEVTRQIRILENDVNEKIACGEASAEMFGDIFYWHIPILAMTADVTQASNEECKKCGMDGYVSKPFEEEQLYTAMARFFKPSS | 1144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g00098 | 1144 | ProSiteProfiles | Histidine kinase domain profile. | 549 | 826 | IPR005467 | - | |
Aip07g00098 | 1144 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 654 | 824 | IPR003594 | - | |
Aip07g00098 | 1144 | Gene3D | CHASE domain | 261 | 488 | IPR042240 | - | |
Aip07g00098 | 1144 | Pfam | Response regulator receiver domain | 1004 | 1136 | IPR001789 | GO:0000160 | |
Aip07g00098 | 1144 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 596 | 821 | IPR036890 | - | |
Aip07g00098 | 1144 | ProSiteProfiles | CHASE domain profile. | 257 | 481 | IPR006189 | - | |
Aip07g00098 | 1144 | SMART | CHASE_2 | 257 | 456 | IPR006189 | - | |
Aip07g00098 | 1144 | PANTHER | HISTIDINE KINASE 2 | 176 | 1141 | - | - | |
Aip07g00098 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 751 | 765 | IPR004358 | GO:0016310|GO:0016772 | |
Aip07g00098 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 769 | 779 | IPR004358 | GO:0016310|GO:0016772 | |
Aip07g00098 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 786 | 804 | IPR004358 | GO:0016310|GO:0016772 | |
Aip07g00098 | 1144 | PRINTS | Bacterial sensor protein C-terminal signature | 810 | 823 | IPR004358 | GO:0016310|GO:0016772 | |
Aip07g00098 | 1144 | SMART | REC_2 | 1002 | 1136 | IPR001789 | GO:0000160 | |
Aip07g00098 | 1144 | Coils | Coil | 519 | 539 | - | - | |
Aip07g00098 | 1144 | CDD | HATPase_EvgS-ArcB-TorS-like | 661 | 824 | - | - | |
Aip07g00098 | 1144 | Pfam | His Kinase A (phospho-acceptor) domain | 542 | 607 | IPR003661 | GO:0000155|GO:0007165 | |
Aip07g00098 | 1144 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Aip07g00098 | 1144 | Gene3D | - | 514 | 605 | - | - | |
Aip07g00098 | 1144 | SUPERFAMILY | CheY-like | 1002 | 1140 | IPR011006 | - | |
Aip07g00098 | 1144 | SMART | HKATPase_4 | 654 | 826 | IPR003594 | - | |
Aip07g00098 | 1144 | ProSiteProfiles | Response regulatory domain profile. | 1003 | 1140 | IPR001789 | GO:0000160 | |
Aip07g00098 | 1144 | Gene3D | - | 210 | 260 | - | - | |
Aip07g00098 | 1144 | Gene3D | - | 67 | 108 | - | - | |
Aip07g00098 | 1144 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 529 | 608 | IPR036097 | GO:0000155|GO:0007165 | |
Aip07g00098 | 1144 | Gene3D | - | 843 | 981 | - | - | |
Aip07g00098 | 1144 | Gene3D | - | 998 | 1143 | - | - | |
Aip07g00098 | 1144 | CDD | HisKA | 542 | 603 | IPR003661 | GO:0000155|GO:0007165 | |
Aip07g00098 | 1144 | Gene3D | - | 606 | 828 | IPR036890 | - | |
Aip07g00098 | 1144 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 176 | 1141 | - | - | |
Aip07g00098 | 1144 | SMART | HisKA_10 | 542 | 607 | IPR003661 | GO:0000155|GO:0007165 | |
Aip07g00098 | 1144 | ProSiteProfiles | Response regulatory domain profile. | 850 | 980 | IPR001789 | GO:0000160 | |
Aip07g00098 | 1144 | CDD | REC_hyHK_CKI1_RcsC-like | 1004 | 1136 | - | - | |
Aip07g00098 | 1144 | Pfam | CHASE domain | 260 | 454 | IPR006189 | - | |
Aip07g00098 | 1144 | SUPERFAMILY | CheY-like | 845 | 978 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g00098 | Aip-Chr7 | 738251 | 746712 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g00098 | 130 | 1142 | Miscellaneous Gene Families | AT5G35750 | 63.717 | 0.0 | 1302 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Aip07g00098 | CHASE | 3.3e-34 | CL0165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g00098 | K14489 | - | gmx:100805107 | 1633.62 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip07g00098 | 07 | 738251 | 746712 | Aip07g00098 | 07 | 738251 | 746712 | ECH |