Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip07g00087 | ATGGTTTCCTCAGAAGAAACTGCAGATCACAATGTTCCTTATGCTATACCACTGCAGAGAGCAAGTCCTCATAGTGATATTACAGAATCACAAGGGATTCATGGAGCTGAAACCTCTTCGTCCAAGCAAAAGGAAGAAACAAGTATTCCTTCTGCTGTGGCTCAAAACAAAGTGAAGGATTCTGATGTTACTGCTTCTGCATTGCAATCAGATCGACAACGAAGCACACACATTGCAGCATCAGTTGAAAAACTTGTGCAGAGCCCTGATACACCTTTCCGTGAAAAACGTCATCCATCACAATCTGGTCATGACAGTCCCTCAATAATACGTGAAAGGGTATCAAAAGATGGGTATAACTGGCGAAAATATGGCCAGAAAAATGTTAAAGGGAATGAATTTATAAGGAGCTATTACAAGTGTACGCATCCGAACTGCCAGGCAAAGAAACAGCTAGAGCAGTCAAACGATGGCCAGATCACAGATTCCATTTGCATTGGTCAGCATAATCATCCTAGGCCTCAATCCAACATCACAAAGCCTGTTGGTCCTGTTCTTCCTGTTCTTGAAGAAGGACTAGACAAGCCCCGTGTTGCCAATGTAGAAGTTGAAGACAAATCATTGAATGAGCATGCAAGTGTACCTCAACAGATGAAGTTTTCACACTCGCTTCAGATTACAAATGTTCCTGCAGCTGATCTGATGAAAGCTGCACATTCACAACTGACCACAGCAAATGACGAGGTTCACAACAATGACTATCCTGACTCAAAACGGCAGAGGATAGACGATAGTAATATTGAAGTCAGTGTAGCTGACAAGTCAACTTGTGCGTCTCGTGTTGTCGTTCAAACTTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGTTGGCGCAAATATGGTCAGAAACTAGTTAAAGGAAATGCAAATCCCAGAAGTTATTATCGATGCTCTAGTCCCGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAGTTGTAATAACTACCTATGAGGGACAACATGATCATGAAATCCCGCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATGCTCAAACAACAACCATTAATGGCAAGCCAGGAACCAATTCTGTATCAAATCCTGTTTCTACAGATACAAGAGGAAGCAGATCAAATGAGAAAGTAAATGGCAACTCAATTACTAAATCAGAGGCTGGTAAGAGTCCTGAAAGTAAATTAAATGGGCAACAACAACAAAAAAATGAAAATGCAGTTGCCAAACAGGATTATGTTGGTGCTAACATCACATGCCAATCAAATTCTGAAGATCCATGTCGATCAAAATCAAACGAACAGCCGAAAGATGACGTAGAAACTAAATCAGAAGGAAAGAACGGATCCCCTAATGTGGTTGTTGTTCATGATACTCCTGGTCAAGAAGGTCAACTCAAGAAGCAATCAGCATCTGATGCAGAAGCTGTCTAG | 1488 | 0.416 | MVSSEETADHNVPYAIPLQRASPHSDITESQGIHGAETSSSKQKEETSIPSAVAQNKVKDSDVTASALQSDRQRSTHIAASVEKLVQSPDTPFREKRHPSQSGHDSPSIIRERVSKDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCQAKKQLEQSNDGQITDSICIGQHNHPRPQSNITKPVGPVLPVLEEGLDKPRVANVEVEDKSLNEHASVPQQMKFSHSLQITNVPAADLMKAAHSQLTTANDEVHNNDYPDSKRQRIDDSNIEVSVADKSTCASRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNANPRSYYRCSSPGCPVKKHVERASHDSKVVITTYEGQHDHEIPPGRTVTHNAATNAQTTTINGKPGTNSVSNPVSTDTRGSRSNEKVNGNSITKSEAGKSPESKLNGQQQQKNENAVAKQDYVGANITCQSNSEDPCRSKSNEQPKDDVETKSEGKNGSPNVVVVHDTPGQEGQLKKQSASDAEAV | 495 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip07g00087 | 495 | SMART | WRKY_cls | 115 | 173 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | SMART | WRKY_cls | 292 | 351 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 448 | 463 | - | - | |
Aip07g00087 | 495 | Gene3D | WRKY domain | 279 | 345 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | ProSiteProfiles | WRKY domain profile. | 110 | 174 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 2 | 462 | IPR044810 | GO:0003700 | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 1 | 111 | - | - | |
Aip07g00087 | 495 | Gene3D | WRKY domain | 107 | 175 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | SUPERFAMILY | WRKY DNA-binding domain | 111 | 174 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | ProSiteProfiles | WRKY domain profile. | 287 | 352 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 367 | 495 | - | - | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 367 | 426 | - | - | |
Aip07g00087 | 495 | PANTHER | WRKY TRANSCRIPTION FACTOR 1 | 2 | 462 | - | - | |
Aip07g00087 | 495 | Pfam | WRKY DNA -binding domain | 116 | 172 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | Pfam | WRKY DNA -binding domain | 293 | 350 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 433 | 447 | - | - | |
Aip07g00087 | 495 | SUPERFAMILY | WRKY DNA-binding domain | 284 | 352 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aip07g00087 | 495 | MobiDBLite | consensus disorder prediction | 23 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip07g00087 | Aip-Chr7 | 688838 | 692720 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip07g00087 | 101 | 366 | WRKY Transcription Factor Family | AT2G04880 | 50.735 | 8.94e-87 | 272 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aip07g00087 | WRKY | 3.2e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip07g00087 | K18834 | - | gmx:100781219 | 523.857 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip07g00087 | 07 | 688838 | 692720 | Aip07g00087 | 07 | 688838 | 692720 | ECH |