Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00062 ATGGAAGAAGAAACAATGTATCCCTGCACTAACTGTGAAGAGTCTTTTGCAAGTAAAATCAAATTGGTTTCCCATTCAAAGCTGAAGCACAAAAAATGTGTTGTTGTTTGCGAACTGTGTGGAAACGGATTCAAAAATAACAAAAACCTTAAATTTCATCAGAATCAGTGTGTTTTTGTTCAAGAAGCCAGCTCAAGGCCCTTGCAAGAGCGCTTTATGTGCGTTCATTGCAAGGGTGGAGCGATTTTTAATCATCCAAACGAATTGAAGAGGCACGCTCGAAAGAAGCACGAGGACTTGCGTGCATTATCAAGGGGAAAACTAAAGACACTAGACGATACATTTGAAGAAAACGGTACGCGCCCTGAATTCCAATTGGCTACCGAGGGAATTGAACAAGCACACGTTGCTGCAAAACTTTTCCAACAGGAGCTGGAAGCAAATAATATACCACTTGCCAATGTACGCATTTGCTATTCTCCATTTTCAAGAACAAAACACACGGCTCAAGTTGTTGCAGCTGCGCTCAATCTTCCTTTTGAAGGCCCCCAGTGCAAGGTGGTGGAAGATCTCCGTGAGCGCTATTTTGAGATTTGGGAAATGGATGAAAAGGATCCACTTGTTGGGCCAGAAGGAGGAGAAAGTGTCAAGGATGTTGCCTGTAGACTTACAAGAGCGGTGACAATTATGGAGTCAGAATATGAAGGTTGTGCCATTTTGGTTGTGAGCCACGGGGATCCCCTGCAAATCTTGCAGACAATTCTGCTTGAATCTATACAACAACAGGAACACCCTAACAAGGACATGGCATCAATTCTAAGTGCAGTTCAAGTAGCACCAATCTTATCCCAGCACCGTAAATATGCTCTGGTAACCGGAGAGCTCAGGCGAGTCGTTTGA 900 0.4367 MEEETMYPCTNCEESFASKIKLVSHSKLKHKKCVVVCELCGNGFKNNKNLKFHQNQCVFVQEASSRPLQERFMCVHCKGGAIFNHPNELKRHARKKHEDLRALSRGKLKTLDDTFEENGTRPEFQLATEGIEQAHVAAKLFQQELEANNIPLANVRICYSPFSRTKHTAQVVAAALNLPFEGPQCKVVEDLRERYFEIWEMDEKDPLVGPEGGESVKDVACRLTRAVTIMESEYEGCAILVVSHGDPLQILQTILLESIQQQEHPNKDMASILSAVQVAPILSQHRKYALVTGELRRVV 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00062 299 SMART c2h2final6 72 97 IPR013087 -
Aip07g00062 299 SMART c2h2final6 7 30 IPR013087 -
Aip07g00062 299 SMART c2h2final6 35 55 IPR013087 -
Aip07g00062 299 ProSitePatterns Zinc finger C2H2 type domain signature. 9 30 IPR013087 -
Aip07g00062 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 67 IPR013087 -
Aip07g00062 299 SUPERFAMILY Phosphoglycerate mutase-like 120 257 IPR029033 -
Aip07g00062 299 Pfam Histidine phosphatase superfamily (branch 1) 120 263 IPR013078 -
Aip07g00062 299 Gene3D Classic Zinc Finger 2 67 - -
Aip07g00062 299 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 116 299 - -
Aip07g00062 299 SUPERFAMILY beta-beta-alpha zinc fingers 3 53 IPR036236 -
Aip07g00062 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 30 IPR013087 -
Aip07g00062 299 CDD HP_PGM_like 126 273 IPR013078 -
Aip07g00062 299 Gene3D - 91 295 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00062 Aip-Chr7 475924 478559 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip07g00062 His_Phos_1 2.5e-15 CL0071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00062 - - gmx:100526853 273.092