Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00043 ATGGCGGGCAAGCAAATTGTTTCCTCTGACCCCCTGAGCTGGGGCCTAGCAGCGGATTCACTCAAGGGCAGCCACTTTCATGAGGTCAAACGCATGGTGGCGGAGTACCGGAAGTCCACCCTATGCATGGGAGCAGGGGAGCCCCTAACCGTGTCGCAGGTGGCTGCCGTTGCCAAGCGTGAGTCTCAAGTCAAGGTGGAGCTCTCTGAGTCTGCGAGGGCAGGCGTCGAGGCCAGCTGCCAGTGGATCATGGACAGCGTTGAGAAAGGCATTACCATCTATGGTGTTACTACTGGCTTTGGTGCTGCCTCCAACAGAAAAACCGATCAGGGACTTGCCCTTCAGAAAGAGATGGTTAGGTTTTTGAATTGTGCAATATTTGGCCATGAAAGTGAGTTATCCCATACCCTGCCAAAATCAGCAGCCAGAGCAGCAATGCTTGTGAGGGTCAACACCCTTCTTCAGGGGTACTCTGGTATCAGATTTGAAATCTTAGAAGCTATCACCAAACTCCTCAACAACAATGTCACCCCCTTATTGCCATTACGCGGTACCATTACTGCTTCTGGCGATCTGATTCCTCTCTCCTACATTGCTGCATTGCTAACTGGCCGGCAAAACTCCAAAGCCCTCGGACCCTCTGGAGAGTCCCTTGATGCAAAGGAAGCTTTCCATTTAGCAGGTCTGCATTCTGGGTTCTTTGAGCTGAAACCCAAAGAAGGACTTGCCCTCGTAAATGGCACCGCCGTGGGGTCTAGTGTAGCTTCTGTGGTGCTCTTTGAGGCAAACATCTTAGCTTTATTGTCTGAAATTTTGTCAGCAGTTTTCACCGAAGTTATGCAGGGGAATCCAGAATTTACACATCATCTGATACATAAGCTGAAGTACCATCCTGGCCAAATTGAAGCTGCTGCTATTATGGAGCACATCTTAGAGGGTAGCTCTTACATCAAACAAGCCAGAATGCAACAGCCAGATCCATTGCAGAAGCCTAAAAAAGATCGTTATGCTCTCCAAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAGTCATCAGGTATTCGACTAAATCAATTGAGAGGGAAATAAACTCTGTCAACGACAATCCTTTGATTGATGTCACTAGTAGCAAGGCTTTGAATGGTGGCAATTTTCAAGGCACCCCAATTGGAGTTTCGATGGATAATGCACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACCGAGCTAGTCAATGACTCGTATAACAACGGTTTGCCATCGAATCTCTCTGTCGGCAGAAATCCGAGTCTGGATTATGGTTTTAAGGCATCTGAGGTTGCCATGGCTGCTTATTGCTCTGAACTTCAATATCTGGCAAACCCAGTAACCAACCACGTGCAAAGTGCTGAGCAACATAACCAAGATGTGAATTCCTTGGGGTTAATTTCTGCTTGGAAAACCGTAGAAGCTGTCGAGATATTGAAGCTAATGTGCTCCACGTATTTGGTTGCGCTTTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTCAAGAGCACAATCAAGGATACTATAAGCGGAGTTGCAAAGAAGACATTAAGCACGAATTTGTTTGGATCATGTGAGAGAGATTTGCTCAAAGTAGTTGATAGAGAATATGTATTCTCCTATATTGATGATCCCTTCAATGTTAGGTATCCATTGATGCCAAAATTGAAACAAATACTTTATGAGGAAGCACAAGCGAGTGCCATCAGCGGGAAGAAAAATGCGAGCGTAGTTTTTGAGGAAATTGGAGCTTTTGAGAATGAGTTGAAGAGTATGTTACCAAATGAGGTTGAAAGTGCAAGGGTGGCCTATGAGAATGGGAATCCAACAGTTCCAGATAGAATTGCAAAAAGCAGATCATACCCATTGTATAAGTTTGTGAGGGAGGAGCTTGGAATAGGGTTGCTCACTGGGGAGAAGACTGCCTCACCAGACAAAGAATTCGAGAAAGTATTTACAGCAATTTGTCAAGGAAAGATTTTTGACTCCATTCTAGACTGCCTCAAAGAATGGAACGGGGTTCCTGTCTCAGTTTTCTAG 2088 0.4559 MAGKQIVSSDPLSWGLAADSLKGSHFHEVKRMVAEYRKSTLCMGAGEPLTVSQVAAVAKRESQVKVELSESARAGVEASCQWIMDSVEKGITIYGVTTGFGAASNRKTDQGLALQKEMVRFLNCAIFGHESELSHTLPKSAARAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNVTPLLPLRGTITASGDLIPLSYIAALLTGRQNSKALGPSGESLDAKEAFHLAGLHSGFFELKPKEGLALVNGTAVGSSVASVVLFEANILALLSEILSAVFTEVMQGNPEFTHHLIHKLKYHPGQIEAAAIMEHILEGSSYIKQARMQQPDPLQKPKKDRYALQTSPQWLGPQIEVIRYSTKSIEREINSVNDNPLIDVTSSKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDSYNNGLPSNLSVGRNPSLDYGFKASEVAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISAWKTVEAVEILKLMCSTYLVALCQAIDLRHLEEIFKSTIKDTISGVAKKTLSTNLFGSCERDLLKVVDREYVFSYIDDPFNVRYPLMPKLKQILYEEAQASAISGKKNASVVFEEIGAFENELKSMLPNEVESARVAYENGNPTVPDRIAKSRSYPLYKFVREELGIGLLTGEKTASPDKEFEKVFTAICQGKIFDSILDCLKEWNGVPVSVF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00043 695 PANTHER HISTIDINE AMMONIA-LYASE 5 693 IPR001106 -
Aip07g00043 695 Gene3D Fumarase/aspartase (Central domain) 249 689 - -
Aip07g00043 695 Gene3D - 2 248 IPR024083 -
Aip07g00043 695 SUPERFAMILY L-aspartase-like 10 693 IPR008948 GO:0003824
Aip07g00043 695 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 10 685 IPR005922 GO:0005737|GO:0006559|GO:0016841
Aip07g00043 695 CDD PAL-HAL 47 511 IPR001106 -
Aip07g00043 695 PANTHER PHENYLALANINE AMMONIA-LYASE 5 693 - -
Aip07g00043 695 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 184 200 IPR022313 GO:0016841
Aip07g00043 695 Gene3D - 514 629 IPR023144 -
Aip07g00043 695 Pfam Aromatic amino acid lyase 49 513 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00043 Aip-Chr7 361611 363897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00043 6 694 Monolignol Biosynthesis Gene Families AT2G37040 69.397 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00043 K10775 - gmx:100787872 1114.37