Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00041 ATGGCTGCACAAGCTCTGGTATCATCTTCATCTCTTACCTTCTCAGGCGAGGCTGCCAGGCAGAGCTTTGGATCAAGACCCAATGGATTCTCCAAAAGGGCCTCCTTCTTAGTCAGGGCGTCTTCCACTCCACCTGTCAAGCAAGGAGCAGACAGACCCTTGTGGTTTGCATCAAAACAGTCTCTCTCTTACTTGGATGGCAGCCTCCCCGGTGACTATGGATTTGATCCACTTGGACTTTCAGACCCTGAAGGAACAGGAGGGTTCATTGAGCCAAGATGGCTGGCATACGGAGAGATCATCAACGGTCGTTACGCAATGTTGGGTGCAGTCGGTGCCATAGCACCCGAGATTCTTGGCAAGGCTGGTCTGATACCGGAGGAGACAGCACTGCCATGGTTCAAGACCGGTGTGATCCCACCTGCAGGAACATACAACTACTGGGCAGACCCTTATACACTCTTTGTCTTGGAGATGGCACTCATGGGATTTGCAGAGCACAGAAGGTTCCAAGATTGGGCCAAACCTGGCTCCATGGGAAAGCAATACTTCTTAGGACTGGAGAAGGGTCTTGGAGGTTCCGGTGACCCAGCTTACCCCGGAGGACCTTTCTTCAACCCCCTTGGTTTTGGCAAGGATGAGAAATCCTTGAAGGATTTGAAGCTCAAGGAAGTGAAGAATGGGAGGTTGGCCATGTTAGCAATCTTGGGTTACTTTGTTCAAGGTCTTGTGACAGGAGTTGGCCCTTACCAAAACCTCCTTGATCATCTGGCTGATCCCGTGCACAACAACGTATTGACCAGTCTTAAGTTCCACTAA 819 0.5079 MAAQALVSSSSLTFSGEAARQSFGSRPNGFSKRASFLVRASSTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00041 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Aip07g00041 272 Pfam Chlorophyll A-B binding protein 63 241 IPR022796 -
Aip07g00041 272 Gene3D Chlorophyll a/b binding protein domain 54 271 - -
Aip07g00041 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
Aip07g00041 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00041 Aip-Chr7 356914 358559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00041 1 272 Chloroplast and Mitochondria Gene Families AT1G61520 86.131 4.18e-168 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00041 K08909 - gmx:100808379 502.671