Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00027 ATGGGTTGCTGCCAGTCATCGTTGATGCTGAGAGTGAGAGAGGGAGGAGACACTCACCCTCACCCTGACAAGAAGGAGAAGGAGAAAGAGAAGGAGAAGGAAAACCACAAGGATCAGGCCCCCTACCTCCGCAACCACCAGAAGGAGTCCCTCGCAGTCGCAGTCCCAGCCACAGTGGCACCCGCTGCTCCTGACAGCTGGTGGCTCTCCTTCTCGGAGTTCTCGCTGGCGGAGCTGAAGGCCGCCACCGACAATTTCAGCTCCGAATTCATAGTGTCGGAGAGCGGGGACAAGCCCCCTAACCTCGTTTACAAGGGGCGCCTCCGCGACCACTGGATTGCCGTCAAGAAGTTCCCGAAGGCCGCCTGGCCCGATCCCAAGCAGTTCGTGGAAGAGGCCTCCGGCGTCGGCAACCTCCGGCACCCCCGCCTGGCCAATCTCATCGGCTACTGCTGCGACGCTGACCACCGCCTTCTCGTGGCCCAGTACATGCCCAACGACACCCTGGCAAAGCACCTCTTCCACTGGGAGAATCAGACGATTGAGTGGGCCATGCGCTTGAGAGTCGCCCATTATATCGCCCAAGCTTTGAATTATTGCAGCTCCGAGGGCCGCCCCTTGTACCATGATTTGAATGCTTACCGTGTTCTTTTCGACGAGGTAGGAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGGACCGTTCTTCTAGATCTGCTTAGCGGCAAGCACATCCCTCCAAGTCAAGCACTAGATATGATACAGGGTAAAAACAACATGCTTTTGATGGATTCACATTTGGAGGGGAAGTTTTCTATAGAAGAGGCAAATGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCTAGGGAGCGACCTGATACAAAGGATTTGGTTACAACACTTGCTCCACTGCATACAAAACCTGATGTTCATTCTCACATTATGCTTGGCATTCCAAAACAAGAGGAAGCTCCATCAACCCCACAACGGCCTCTTTCTGCAATGGGAGAAGCTTGTTCTAGAATGGATCTAACTGCAATCCATCAGATCTTGGTTGCGACACACTACAGAGACGATGAGGGAACCAATGAGTTGTCATTCCAAGAGTGGACCCAACAGATGAGAGACATGCTGGAGGCAAGGAAGCGTGGAGACTGTGCATTTCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTATTTGCACGGCGCAGTCTGTGCTATCTTTTATGTGATCAGCCAGACCCTGCACTCCGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTATATGCAATCTGTCGCCCTTGCAAAGTTGGACATGCAGAAGGATGCCACGGATATGCTAAATGAGGCTGCTGCATTGGAAGAGAAGAGGCAAAGGGGAGGGAGAGGATCCTAG 1482 0.5196 MGCCQSSLMLRVREGGDTHPHPDKKEKEKEKEKENHKDQAPYLRNHQKESLAVAVPATVAPAAPDSWWLSFSEFSLAELKAATDNFSSEFIVSESGDKPPNLVYKGRLRDHWIAVKKFPKAAWPDPKQFVEEASGVGNLRHPRLANLIGYCCDADHRLLVAQYMPNDTLAKHLFHWENQTIEWAMRLRVAHYIAQALNYCSSEGRPLYHDLNAYRVLFDEVGRNGRVTPESVIYSFGTVLLDLLSGKHIPPSQALDMIQGKNNMLLMDSHLEGKFSIEEANVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVHSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDCAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDATDMLNEAAALEEKRQRGGRGS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00027 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 222 IPR045845 GO:0004672|GO:0009742
Aip07g00027 493 MobiDBLite consensus disorder prediction 1 42 - -
Aip07g00027 493 SUPERFAMILY Protein kinase-like (PK-like) 68 313 IPR011009 -
Aip07g00027 493 Pfam Protein tyrosine and serine/threonine kinase 108 219 IPR001245 GO:0004672|GO:0006468
Aip07g00027 493 SUPERFAMILY TPR-like 385 486 IPR011990 GO:0005515
Aip07g00027 493 Coils Coil 465 485 - -
Aip07g00027 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 222 - -
Aip07g00027 493 Gene3D Phosphorylase Kinase; domain 1 65 163 - -
Aip07g00027 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 223 491 - -
Aip07g00027 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 223 491 IPR045845 GO:0004672|GO:0009742
Aip07g00027 493 Gene3D Transferase(Phosphotransferase) domain 1 165 221 - -
Aip07g00027 493 Gene3D Transferase(Phosphotransferase) domain 1 222 325 - -
Aip07g00027 493 ProSiteProfiles Protein kinase domain profile. 89 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip07g00027 493 MobiDBLite consensus disorder prediction 14 42 - -
Aip07g00027 493 Gene3D Tetratricopeptide repeat domain 382 490 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00027 Aip-Chr7 276939 281410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00027 74 316 Glycoside Hydrolase AT3G07070 31.879 2.28e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Aip07g00027 PK_Tyr_Ser-Thr 6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00027 K14500 - gmx:100808907 811.601