Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00021 ATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGGAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAACCCCAAAAATTCGCGAATGTTCACAAGATCTTCGGCGCGAGCAATGTCACCAAGCTTCTCAATGAGCTTCTGCCTCAGCAGAGGGAAGACGCAGTGAATTCCCTCGCATACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTACGGCTGCGTTGGCGCCATATCTTACCTTCAGAGACAAGTCCAGAGACTTCAGAAGGAACTTGATGCTGCCAACGCGGATCTTCTTCGCTACGCTTGCAACGAAATTCCTCCTCCACATCATCATGTCCCAACCCTAGCACCACCATTAACTCCCACAATTCATCATCAACTTACACAAAGGCACTTTGGTGGTGCAAGAATTGGCAATGATCATGGAATTGGATTTTATAGGCAATCTCCAACCACCTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCAGAAGGAGGAGGTAATTTATGA 570 0.4754 MASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPPHHHVPTLAPPLTPTIHHQLTQRHFGGARIGNDHGIGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00021 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Aip07g00021 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Aip07g00021 189 Coils Coil 89 116 - -
Aip07g00021 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 185 - -
Aip07g00021 189 PANTHER ELONGATED PETIOLULE 1 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00021 Aip-Chr7 192686 193352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00021 1 113 AS2 family AT5G63090 93.860 5.47e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip07g00021 LOB 3.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00021 - - gmx:100799774 280.411