Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03909 ATGCAATGCTTCAAATCCTATCCATTACTCTCTCTTCACTATTCACTATTCACTTCCGGGCCTGTTCCAGTAGGGGAGAGTCCTATGCCGCCTAAAGACCTTGCATTCGACATTGCTGTCGGGGAATCATTTACTTATGAGCAAATTCTCAAGTTGACTGGTAATTTTGCTGAAGCAAATATCATCAAGCATGGTCATTCTGGAGACCTCTTCTGGGGAGTAATGGAAAACGGAGCTACTGTTGTCATCAAAAAGGTAGATTTGAGTTTGTTCAAGAGAGAATCATATGTTGTGGAGTTGGAATTATTAAGCAAGGTTTCACATGCAAGATTGATCCCAATCTTGGGACATTGCTTGGAGAATGACAATGAGAAATGTATAGTTTACAAGTATATGCCAAATGGAGATTTGGCAAGTTCTTTGCAGAGAGTCACCGATGCAGATGGTAAATCGAAGTCCCTTGATTGGATCACGAGATTGAAAATCGCTACAGGAGCTGCCGAAGGCCTTGCTTATCTACATGATTGCAGCCCTCCCCTCGCTCACAGAACAGCACCAATTGCAGAACCTTTAGAGCTTCGAATTGAAGAGAAACAGAGCAAAGAACAACATGAAGTTCTGCTTTGA 627 0.4226 MQCFKSYPLLSLHYSLFTSGPVPVGESPMPPKDLAFDIAVGESFTYEQILKLTGNFAEANIIKHGHSGDLFWGVMENGATVVIKKVDLSLFKRESYVVELELLSKVSHARLIPILGHCLENDNEKCIVYKYMPNGDLASSLQRVTDADGKSKSLDWITRLKIATGAAEGLAYLHDCSPPLAHRTAPIAEPLELRIEEKQSKEQHEVLL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03909 208 Gene3D Transferase(Phosphotransferase) domain 1 132 185 - -
Aip06g03909 208 PANTHER OS03G0724300 PROTEIN 21 183 - -
Aip06g03909 208 PANTHER OS01G0253100 PROTEIN 21 183 IPR045271 GO:0004714|GO:0006468
Aip06g03909 208 Pfam Protein tyrosine and serine/threonine kinase 62 176 IPR001245 GO:0004672|GO:0006468
Aip06g03909 208 ProSiteProfiles Protein kinase domain profile. 56 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03909 208 SUPERFAMILY Protein kinase-like (PK-like) 37 183 IPR011009 -
Aip06g03909 208 Gene3D Phosphorylase Kinase; domain 1 34 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03909 Aip-Chr6 136780432 136781504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03909 21 183 Miscellaneous Gene Families AT2G16250 59.524 3.60e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Aip06g03909 PK_Tyr_Ser-Thr 7.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03909 - - aip:107647820 375.941