Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03901 ATGTTTCACCGCCGGAGCAATTCTCATCAAGATCATGAAAACAGCGAGGTTTATGCCGAATCCAAGGTTAAGGAGCTAAAGGGAGCAATGGGACCATTATCCGGGCGCAGCTTGAAGTACTGCACAGATGCTTGTTTTAAGAGATATTTGGAAGCTCGGAATTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGATACACTAAATTGGAGATCAACCTATAAGCCTGAGGAGATTCGCTGGCATGAGGTTGCCGTGGAAGGGGAGACAGGGAAACTGTATAGAGCAAGTTTTCATGACAGGCAAGGAAGGACTGTTCTTATCTTGAGACCTGGAATGCAGAACACCAAATCAATGGAGAATCAGATGAAGCACTTGGTGTATCTTTTGGAAAATGCAATGCTTAACCTTCCACCAGGTCAAGAACAAATGGCATGGTTGATAGATTTCACTGGCTGGTCATTGACTAATAGCGTGCCGGTTAAGTTGGCCAGAGACACCATCAACACTCTTCAGAATCACTATCCTGAGAGGCTTGCCATTGCATTTCTTTACAATCCTCCAAGAATTTTTGAAGCTTTTTGGAAGATAGTCAAGTACTTTTTGGATACAAAGACATTTGAGAAAGTGAAGTTTGTGTATCCCAAAAACAAAGATAGTGTGGAACTCATGAAGTCTTATTTTGATGATGAGAATCTTCCAAAAGAATTAGGAGGAAAAAGCACTATGAAGTATAACCATGAAGAGTTCTCAAGATTAATGGTTCAAGATGATTTGAAATGTGCAGCATTTTGGGGTTCTGAATCAGAAGTAGCTCCAGATCCGGATTACAATGAAGCCACCTCAATTTGA 852 0.4131 MFHRRSNSHQDHENSEVYAESKVKELKGAMGPLSGRSLKYCTDACFKRYLEARNWNVDKSKKMLEDTLNWRSTYKPEEIRWHEVAVEGETGKLYRASFHDRQGRTVLILRPGMQNTKSMENQMKHLVYLLENAMLNLPPGQEQMAWLIDFTGWSLTNSVPVKLARDTINTLQNHYPERLAIAFLYNPPRIFEAFWKIVKYFLDTKTFEKVKFVYPKNKDSVELMKSYFDDENLPKELGGKSTMKYNHEEFSRLMVQDDLKCAAFWGSESEVAPDPDYNEATSI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03901 283 Pfam CRAL/TRIO, N-terminal domain 41 66 IPR011074 -
Aip06g03901 283 CDD SEC14 99 240 IPR001251 -
Aip06g03901 283 PANTHER RANDOM SLUG PROTEIN 5-LIKE 5 270 - -
Aip06g03901 283 Pfam CRAL/TRIO domain 92 239 IPR001251 -
Aip06g03901 283 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Aip06g03901 283 SMART sec14_4 87 242 IPR001251 -
Aip06g03901 283 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Aip06g03901 283 Gene3D - 3 268 IPR036865 -
Aip06g03901 283 SUPERFAMILY CRAL/TRIO N-terminal domain 20 83 IPR036273 -
Aip06g03901 283 SUPERFAMILY CRAL/TRIO domain 81 255 IPR036865 -
Aip06g03901 283 PANTHER GH16843P 5 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03901 Aip-Chr6 136748696 136751636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03901 48 234 Acyl Lipid Metabolism Gene Families AT1G55840 27.885 2.01e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03901 - - gmx:100800854 505.753