Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03864 ATGCACCATCTCGATGTCTCGGAAAGAAGGGCAATAACGGACGGTTATAAAGGCAGCTTAAGCACTTGGTGGTCGAATATCAGGGACGAATTTATACAAATATTCCAGCCAATTTTTGCAACATTGAAGAATATGTTTTTGGAGGACCAGTATCATGGTAAATTGAGTATACACAACATCAAAGTTGGATTTTCCGGGAGCGGGCAGTTGCGTGCTATTTTAACAGATATAGAATGCTGGAATGATGGGGCTAGTACTGAATACATTCAAGACAAACAACTGCTTGATGTGAAGGTGTTCAGATCAATCATTTACCAGATTATTAATCTTCCTTTTGAAGCCGGTAACGAGCCTCACATTGCTGAAGTGGAAGAATTATATCATCAACTTGATTTCCTCGAAAAAAAATATGAAGCCAGTATTTCCATGGAAACTACAATTTTTCCATTCACAACTCTTCTGATTCCTTTGCCAAGTGAACCACTGAGTTCATCAACAATCATAGTTGCCAATGATCCACCATATGATTCTACTTCACCACATGCCAAAACCGGTTCCAAAGGGATCGAGTTAAAGATACTAGTAATATTCAATATAGTTCTTGCTGCTATATTGATTCTGAGCATCATGTCATCTCTAGTGTCTTTGATAGGAAAGATATCAAAAAGATTCATCAAGGCAGGCAAAATCCATAAGAGAAATGGCGTGATTTCAGAAGATATCCCCGTCGAAATAGCGAGCATTGATGTGAACTCTTCCAAATTGTACAAGTTTGAGGAAATCAAGGATGCTACCGAAAATTTCAGTTCAAGGAACAGAATCAAAGGTTCTGTATTTCACAGCAAATTCGGCAACAAAAGGGAAAGTTTTGCTGTCAAAAGAAGAATAAGTAAAGGGTATGCATCAAAGGAAATAAATTTGCTTAGAAGAATCAACCATTTCAACTTGATCAAGCTTCAAGGGTATTGTGAAAATGAAGATTTGTTCTATCTGGTGTTTGAATTCATGGAAAATGGATCCTTAAGAGAATGGCTTAGTAGTGAAGAAAACTCATTTTTGCATAAAAGTTGGTCAAAGAGGATTCAAATTGCTTTGGATATTGCAAATGGACTTCAATATCTTCACAACTTCACATATCCTTGTTATGTTCACAATGGTATTAACAGTGGAAACATTCTTCTAAACAAAGATCTAAGGGCAAAAATAGCAAATTTTTCTCTTGCAGAAGAATTATTAGAAAGGAGAATGATAATAAGTTCAAGTTCTTCTCACACTTCAGATGATTTTTATGCCTTTGGAGTGGTACTTTTGGAATTGATCACTGGCAAAGAATGTGTTACAATGCCTGGTTTATCAAGAGAAGGAATAATAATGGTTTCTAGGATCATGATGAATAATCTCATTGGCAAGGAGCATGAAGAAGAGAAGTTGAGTTTTTTCTTTGATCCAAGGCTCATTGGAAACATTGAGAGAAAAAGTGCTTTGATGCTAGTTAAGCTATGTTTAGCTTGCTTGAATCAAGAATCAGAAAGTAGACCAAACATGTCAGAGGTGGTCTCTACCTTGTGGAAAACACTTTCTGAGTCCCATAATAATTGTTGGAGAAAATTGTCATGTTGA 1620 0.363 MHHLDVSERRAITDGYKGSLSTWWSNIRDEFIQIFQPIFATLKNMFLEDQYHGKLSIHNIKVGFSGSGQLRAILTDIECWNDGASTEYIQDKQLLDVKVFRSIIYQIINLPFEAGNEPHIAEVEELYHQLDFLEKKYEASISMETTIFPFTTLLIPLPSEPLSSSTIIVANDPPYDSTSPHAKTGSKGIELKILVIFNIVLAAILILSIMSSLVSLIGKISKRFIKAGKIHKRNGVISEDIPVEIASIDVNSSKLYKFEEIKDATENFSSRNRIKGSVFHSKFGNKRESFAVKRRISKGYASKEINLLRRINHFNLIKLQGYCENEDLFYLVFEFMENGSLREWLSSEENSFLHKSWSKRIQIALDIANGLQYLHNFTYPCYVHNGINSGNILLNKDLRAKIANFSLAEELLERRMIISSSSSHTSDDFYAFGVVLLELITGKECVTMPGLSREGIIMVSRIMMNNLIGKEHEEEKLSFFFDPRLIGNIERKSALMLVKLCLACLNQESESRPNMSEVVSTLWKTLSESHNNCWRKLSC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03864 539 Gene3D Transferase(Phosphotransferase) domain 1 336 536 - -
Aip06g03864 539 ProSiteProfiles Protein kinase domain profile. 211 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03864 539 Gene3D Phosphorylase Kinase; domain 1 241 335 - -
Aip06g03864 539 Pfam Protein tyrosine and serine/threonine kinase 301 522 IPR001245 GO:0004672|GO:0006468
Aip06g03864 539 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 143 528 - -
Aip06g03864 539 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 143 528 - -
Aip06g03864 539 SUPERFAMILY Protein kinase-like (PK-like) 250 529 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03864 Aip-Chr6 136298263 136301096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03864 250 529 Receptor kinase-like Gene Family AT2G33580 36.275 5.03e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip06g03864 PK_Tyr_Ser-Thr 2.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03864 - - aip:107647804 759.599