Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03855 ATGATGAGCAGTAGAAAAGGTTTCTGCTTCTCCCGCTTAAAGTTGCTGCTCCTGATTGTTACAGTTGCAGCAGCTGCTGATCATAACAGAACATGTACGCCCTCCGCATGCGGCAAAGTCACCACCATAACACATCCTTTCCGGCTAAGGGGCGACCCTGCAAGCTGTGGCGACCGGAGGTACGAGTTGTCTTGCGAGAATAACATCACCCTCTTATATCTTTTTCCCGGTAAAACCTACCATGTTGAGGCAATAAACTACAACAACTTCACGATCCGGCTTCTAGATCCATCCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCTTAACCAATTTCAGTACCTTTGGGGATGACTATTATTACAAAACAGTCGCCGAAGTCGGCACCGGAAAATATGAATTCCTTCAAGAACGAGTCTCCTTAAATGGCTCCACACCGGAGGAGAACGCAGTGAGAATGTTCGAGCACGTGGTGTTCTTGAACTGCACCAATCCGGTGAGGGACGATCCACGATACGTGAACGCTGCTCCTTGCATTAAAGAAGGGGGTAATAATGTTTATGCTGTTCTTGGAGACTTGGCGGTGGTTGAATTAAGAGATGATTGCCGTGTGAAGCTGATTGCAGCCTCATCGTTTCTTGTTCCACCGAGATTATGGCAAGATTCAGTGTTCATCGAAGAGAACTTGGCATACTCTGAAATCCATAAGAAACTCAGTTACGGATTTGAACTTTCGTGGATGTATGGGTTTGCTTGTGAAGATAAATGCGGGATGAAGAATTTTTGCTTATTCAACGAAATCACTCAGAATATCACCTGTGGGGATCCGGATTCCCTCGTCCCCTGTGACTACTATTCACTGCTGATGGTGAACGACAAATGTTATTTTGCATACGGAATTTTGAAAGGACTTCGCAAAGTGTGGCACACGGATAGTGGTGAACACTTCTCTAAAAGAGATGTAATACCTGTTGTTAAGGTTGGATTATTCATGGGATTGTTTCTGATGTCATACATAATCCTCAAATACTCAATAGGTGTCATGTTTTTCTTTTCATTGTTGATCTACACGTTTCGAAGAAGGCATATATCAATCTATGAAAATATTGAGGATTTTCTACAAGGAAATACTCTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACAAGAGGTTTTAAGGAGAAGTTGGGAGAAGGAGAATTTGGTGCAGTATACAAAGGAAAACTACAAAGTGGGCCTTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAAGCTAATGGCCAAGAATTTATCAGTGAAGTTGCTACCATTGGTAGAATACACCATGCAAATGTGGTAAGGTTGATTGGGTTTTGTGTGGAAGGTTCAAAACGCGCTCTTATATATGAATTCATGCCAAATGGTTCTTTAGATAAATATATATTTTCTAAAGAAAAAAATGTATCTCTAACTTCTGAGAAGATGTTTGAGATATCCCTTGGTGTGGCACGTGGTATGGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTACATTTTGATATCAAGCCTCACAACATTCTTCTTGACGAGAACTTCATTCCTAAGGTGTCAGACTTTGGTCTTGCAAAACTATATCCTCTTGATAATAGTATTGTGACTTTGACTGCGGCAAGAGGAACCATTGGTTACATGGCCCCAGAATTGTTCTATCAAAATATTGGAGCATTATCTTACAAGGCTGATGTGTATAGTTTTGGAATGCTTTTGATGGAAACAGCGAGTCAAAGAAGAAATTTAAATCCTCATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGCTGCTGAGGAAACTGATGAGATTGAGATGGAAACTTTTATGGATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCGTTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAGTAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCTGAAGTTGACTCATCAGGAGTAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAAGTACATCCAATCCCTTGTTAAAGTTTTCTGCTTGA 2190 0.4009 MMSSRKGFCFSRLKLLLLIVTVAAAADHNRTCTPSACGKVTTITHPFRLRGDPASCGDRRYELSCENNITLLYLFPGKTYHVEAINYNNFTIRLLDPSISENDCSTLPRYSLSLTNFSTFGDDYYYKTVAEVGTGKYEFLQERVSLNGSTPEENAVRMFEHVVFLNCTNPVRDDPRYVNAAPCIKEGGNNVYAVLGDLAVVELRDDCRVKLIAASSFLVPPRLWQDSVFIEENLAYSEIHKKLSYGFELSWMYGFACEDKCGMKNFCLFNEITQNITCGDPDSLVPCDYYSLLMVNDKCYFAYGILKGLRKVWHTDSGEHFSKRDVIPVVKVGLFMGLFLMSYIILKYSIGVMFFFSLLIYTFRRRHISIYENIEDFLQGNTLMPIRYSYKEIKKMTRGFKEKLGEGEFGAVYKGKLQSGPFVAIKMLGKAKANGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALIYEFMPNGSLDKYIFSKEKNVSLTSEKMFEISLGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGALSYKADVYSFGMLLMETASQRRNLNPHAEHSSQLYFPFWIYDQLAAEETDEIEMETFMDEERSELAKKMFIIALWCIQLKPSDRPSMSKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSEVDSSGVDASNNSYVSSSFEEESTSNPLLKFSA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03855 729 MobiDBLite consensus disorder prediction 694 729 - -
Aip06g03855 729 MobiDBLite consensus disorder prediction 682 729 - -
Aip06g03855 729 Pfam Protein tyrosine and serine/threonine kinase 400 671 IPR001245 GO:0004672|GO:0006468
Aip06g03855 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
Aip06g03855 729 SMART serkin_6 398 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03855 729 Gene3D Phosphorylase Kinase; domain 1 375 472 - -
Aip06g03855 729 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Aip06g03855 729 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Aip06g03855 729 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 15 700 - -
Aip06g03855 729 ProSiteProfiles Protein kinase domain profile. 398 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03855 729 SUPERFAMILY Protein kinase-like (PK-like) 383 672 IPR011009 -
Aip06g03855 729 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 700 IPR045874 GO:0004672
Aip06g03855 729 Gene3D Transferase(Phosphotransferase) domain 1 473 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03855 Aip-Chr6 136221556 136225804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03855 15 685 Receptor kinase-like Gene Family AT5G38260 33.577 2.41e-102 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03855 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03855 - - ahf:112697889 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03855 06 136221556 136225804 Aip06g03855 06 136221556 136225804 ECH