Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03854 ATGCCCAAGGGGACACAATACTATGAATCAATTATTTTACCCGTTATAGGTGCAGCTCTCCTGTTCTCAACACTGGCTGCCTTGTATTATGTATATTGCTATTATAGAAACAAAGGGGAAGATCAACAAAGAGTTCAAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACCAGATTCTCTTATGCTGATATCAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTGTCCAATCAAATTCTGGTTGCTGTCAAGATTCTCAATAACACAGACGGAGATGGGAAAGAATTCATAAATGAAGTGGGAACTATGGCCAAAATCCACCATGTCAACGTGGTTCGCTTGCTTGGATATTGTGCTGATGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATCGCTTCGTCCAGCGACAAAGAAACCTTCCTTGGATGGAACAAGTTGCATCAGATTGCTCTCGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATGACGGTTTCACTCCAAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAAAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACCTTAGGCTACATGGCGCCTGAAGTTTTCTCCAGAAACTTCGGCAATGTATCTTATAAATCCGATATCTACAGCTATGGGATGTTATTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCTAGTCAAGAAACATTTCAAGTTCTATATCCCAATTGGATACACAATTTGCTTGAAGGAGATGATACATATATTCCTATTGATGATGATGGAGATTTTAGAATAGCAAAGAAACTGGCAATAGTGGGACTATGGTGCATACAGTGGCACCCGGTTCAGCGTCCGTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAAGCAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCAGCTGCGACTACTTCAAGTGCAATTATTCCAGCAAGACGTCTGAATTTGGAGTTGGAAGTAATCCCAGAAACAGACTAG 1146 0.4049 MPKGTQYYESIILPVIGAALLFSTLAALYYVYCYYRNKGEDQQRVQTFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIASSSDKETFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDDGFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVQRPSMKSVVQMLEGEESKLKVPPNPFESAAATTSSAIIPARRLNLELEVIPETD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03854 381 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Aip06g03854 381 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03854 381 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 380 IPR045874 GO:0004672
Aip06g03854 381 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Aip06g03854 381 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 380 - -
Aip06g03854 381 Pfam Protein tyrosine and serine/threonine kinase 72 339 IPR001245 GO:0004672|GO:0006468
Aip06g03854 381 SUPERFAMILY Protein kinase-like (PK-like) 51 340 IPR011009 -
Aip06g03854 381 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03854 Aip-Chr6 136219394 136220740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03854 32 352 Receptor kinase-like Gene Family AT1G66980 49.240 7.33e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03854 PK_Tyr_Ser-Thr 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03854 - - ahf:112805998 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03854 06 136219394 136220740 Aip06g03854 06 136219394 136220740 ECH