Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03853 ATGTTATCATTGACCATGGCAGCATTATTATTGGTGCTGCTGCTGAATCTGAATGTGGAAATCGGAAATTGCAATGATGATCCCGATCCATGTCCCGTGCGTCTCTACTGTTCAGAAGACGAAACCAATATCCTTGAGCTGCCTGCCTTTCCATCCTCAGTAAAACTCCCCGTCACAAGCATTAGCTACACATCAAACACCTTACAAGTATATGATCCCAAACACTGTTTTCCACAACTCTTTCTCACACTCAATTATTCATCATTTTATCCTTTCCAATCCATTAAACAATCACTTGATTTCGATAGTTTTGATGATCCTCTACAGCCAACAAACTGTACTTTCTTTGATTGCTCTTCAAGCATAGAACTAAACATCCTCAGAGGCTACTACGAGGAACAAGATCCGTTATCTTGCCCGATTCTTATTGCCTTAGATGACGATAACATCATCGAGTCCAACCTTGTATTCTGCACAAAATTGACTCGTCATGTCTTGCCAATTTCTGTATGTAAGATACAGTGGAATTGGGAACCATTATACTTGGTATGGTCCACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAAGGGCACTGAACACCATGAATCCATTCTTTTACCCCTTACAGGTGCAACTCTCCTTGTGCTAATACTGGGTGTCATGTATCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAACAAAGAGTTGAAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACAAGATTCTCTTATGCTGATATCAAGAAAATTACAAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTAACTAATCAAATTCTGGTTGCCGTCAAGATTCTCAATAAAGCAGATGGAGATGGGACAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGTGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTCTGTCAAGCGAAAAGGAAACCTTCTTTGGATGGAACAAGATGCATCAGATTGCTGTGGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTGACCACAGAATTCTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATCAAAATTTCACTCCTAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAAAATCGAAGCACTGTGTCCATGACAGCAGCTAGGGGAACCTTAGGATACATGGCGCCTGAAGTTTTTTCTAGAAACTTCGGTAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGTTGTTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCGAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTCGAAGGAGATGACACGTATATTCCAATTGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAGATACGTTAAAAGTGCCTCCAAATCCTTTTGAATCTATAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAAATTCTTGAATTTGGAATTGGAAGTAATTCCAGAAACAGACTAG 1743 0.4028 MLSLTMAALLLVLLLNLNVEIGNCNDDPDPCPVRLYCSEDETNILELPAFPSSVKLPVTSISYTSNTLQVYDPKHCFPQLFLTLNYSSFYPFQSIKQSLDFDSFDDPLQPTNCTFFDCSSSIELNILRGYYEEQDPLSCPILIALDDDNIIESNLVFCTKLTRHVLPISVCKIQWNWEPLYLVWSTETFKSGCFVACNVSNKGTEHHESILLPLTGATLLVLILGVMYHIYCYYRNKGEDQQRVETFLKDYEALNPTRFSYADIKKITKQFKDKLGEGAHGAVYKGKLTNQILVAVKILNKADGDGTEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIALSSEKETFFGWNKMHQIAVGIAKGIEYLHQGCDHRILHFDINPRNVLLDQNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGEEDTLKVPPNPFESIAATSSSAIIPAKFLNLELEVIPETD 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03853 580 Pfam Protein tyrosine and serine/threonine kinase 271 538 IPR001245 GO:0004672|GO:0006468
Aip06g03853 580 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Aip06g03853 580 PANTHER RUST RESISTANCE KINASE LR10-RELATED 25 579 IPR045874 GO:0004672
Aip06g03853 580 Gene3D Transferase(Phosphotransferase) domain 1 344 548 - -
Aip06g03853 580 ProSiteProfiles Protein kinase domain profile. 269 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03853 580 Gene3D Phosphorylase Kinase; domain 1 242 343 - -
Aip06g03853 580 SUPERFAMILY Protein kinase-like (PK-like) 249 539 IPR011009 -
Aip06g03853 580 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 25 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03853 Aip-Chr6 136215614 136217435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03853 235 551 Receptor kinase-like Gene Family AT1G66910 47.385 1.21e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03853 PK_Tyr_Ser-Thr 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03853 - - ahf:112805998 867.455