Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03851 ATGACATCAGGTTTTAGGGAAAAGTTGGGAGAAGGAGGATTCGGCTCAGTCTACAAAGGACAGTTAATAAGTGGGCCCTTTGTAGCCATAAAAATGTTGGGTAAAGCAAAGGAAAATGGCCAAGAATTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCTAATGTGGTGAGGTTGATTGGATTCTGTGTCGAGGGTTCAAAACGCGCTCTTGTTTACGAATTTATGCCGAATGGTTCTCTAGATAAGTTTATTTTTTCCAAAGTGGATAGTGTATCATTGACATACCAGAAACTTTTTGAAATATCTCTTGGTGTGGCTCGTGGTATAGCTTATCTGCACGAAGGTTGTGACATGCAGATTTTACATTTTGATATCAAGCCTCATAACATTCTTCTTGACGAAAACTTCATTCCTAAAGTGTCAGACTTTGGTCTTGCAAAGCTTTATCCTCTTGATAACAATATTGTAACTTTGACAGCAGTAAGAGGAACAATTGGTTACATGGCTCCGGAATTGTTCTACCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTTGAATCCAAACGCAGAGCATTCGAGCCAATTTTACTTTCCATTTTGGATATATGATCAATTGGCTCGGAAAAATGATGAGATAAAAATGGAAACTTTGATGCATGAAGAAACGAGTGAACTAGCAAAAAAGATGTTCACAACTGCACTGTGGTGTATACAATTAAAGCCAAGTGATCGTCCTTCGATGAATAAAGTAGTGAAAATGTTAGAAGGGGATGTTACAAGCATTGAAATGCCTCCAAGGCCTTCATATTATCCAAATGAGGATTCTGAGATTAATTCAGGAGTAACTACTTTAAATAAGTCTTCAGGCTCTTCAGGTTTTGATGAGGAGGAAATTACAACCAATTGTATGTGA 975 0.3744 MTSGFREKLGEGGFGSVYKGQLISGPFVAIKMLGKAKENGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALVYEFMPNGSLDKFIFSKVDSVSLTYQKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNNIVTLTAVRGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEMASQRRNLNPNAEHSSQFYFPFWIYDQLARKNDEIKMETLMHEETSELAKKMFTTALWCIQLKPSDRPSMNKVVKMLEGDVTSIEMPPRPSYYPNEDSEINSGVTTLNKSSGSSGFDEEEITTNCM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03851 324 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 301 IPR045874 GO:0004672
Aip06g03851 324 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03851 324 MobiDBLite consensus disorder prediction 304 324 - -
Aip06g03851 324 SUPERFAMILY Protein kinase-like (PK-like) 6 276 IPR011009 -
Aip06g03851 324 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 301 - -
Aip06g03851 324 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Aip06g03851 324 ProSiteProfiles Protein kinase domain profile. 3 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03851 324 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Aip06g03851 324 Pfam Protein kinase domain 7 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03851 324 CDD STKc_IRAK 9 277 - -
Aip06g03851 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aip06g03851 324 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03851 Aip-Chr6 136205587 136206561 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03851 1 288 Receptor kinase-like Gene Family AT1G66910 51.034 1.77e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03851 Pkinase 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03851 - - ahf:112697889 525.013