Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03850 ATGATGAGCAGTAGGAAAGGTTTCTGCTTCTCCCGCTTAAAGTTGCTGCTCCTGATTGTTACAGTTGCAGCTGCTGCTGATCATAACAGAACATGTACGCCCTCCGCATGCGGCAAAGTCACCACCATAACACATCCTTTCCGGCTGAGGGGCGACCCTGCAAGCTGTGGCGACCGGAGGTACGAGTTGTCTTGCGAGAATAACATCACCCTCTTATATCTTTTTCCCGGTAAAACCTACCATGTTGAGGCAATAAACTACAACAACTTCACGATCCGCCTTGTAGATCCAGCCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCTAACCAATTTCAGTACCTTTGGGGATGACTATTATTACCAAAGAGTCGCCGAATTCGGCACCGGAAAATACGAATCCCTTCAAGAACGAGTCTCCTTAAATGGCTCCACACCGGAGGAGAACTCAGTGAGAATGTTCGAGCACGTGGTGTTCTTGAACTGCACCGATCCGGTGAGGGACGATCCACGATACGTGAATACTGCTCCTTGCATTAACGAAGGCGGTAATAATGTTTATGCTGTTCTTGGAGACTTGGCGGTGGTTGAATTAAGAGATGATTGCCGTGTGAAGATGATTGCAGCCTCATCGTTTCTTGTTCCACCGAGATTATGGCAAGATTCAGTGTTCATCGAAGAGAACTTGGCATACTCTGAAATCCATAAGAAACTCAGTTACGGATTTGAACTTTCGTGGATGTATGGGTTTGCTCGTGAAGATAAATGCGGGATCAAGGATTTTTGCTTATTCAACGAAATCACTCAGAACATCACCTGTGGGGATCCGGATATTCCCGTCTGTGATTACACTTCACTGCTGAACTACAAATGTGGAAACGTGTCAAAGCTACAGATAATTGCACAAGATTTTGCATACGGAATTTTGAAAGGACTTTGCAAAGTGGTAGACATGGACAGTGGTGAACGCTTCTCCAAAAAAGATGTAATACCTGTTGTTAAGGTTGGATTATTCATGGGATTGTTTCTGATGTCATACATAATCCTCAAATACTCAATAGGTGTCATGTTTTTCTTTGCATTGTTGATCTACACGTTTCGAAGAAGGCATATATCAATCTATGAAAATATTGAGGATTTTCTACAAGGAAACACTCTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACGAAAGGTTTCAAGGAGAAGTTGGGAGAAGGAGGATTTGGTGCAGTGTACAAAGGAAAACTACGAAGTGGGCCTTTTGTAGCCATAAAAATATTGGGTAAAGCCAAAGCTAATGGCCAAGAATTTATCAGTGAAGTTGCTACCATTGGTAGAATACACCATGCAAATGTGGTAAGGTTGATTGGATTTTGTGTCGAGGGTTCAAAACGCGCTCTTATATATGAATTCATGCCAAATGGTTCTCTAGATAAATATATATTTTCCAAAGAAGAAAGTGTATCTCTAACTTCCCAAAAGATGTTTGAGATATCTCTCGGAGTGGCACGCGGTATGGCTTATTTGCATGAAGGCTGTGATATGCAAATTTTACATTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTCGCAAAACTATATCCTCTTGATAATAGTATTGTAACATTGACTGCAGCAAGAGGAACCATTGGTTACATGGCCCCAGAGCTGTTTTATCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATAGCGAGTCAAAGAAGAAATTTGAATCCACATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCGGTTGGCTGTTGAGGAAAATGATGAGATTGAGATGGAAACTTTTATGCATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCATTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAATAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTATCCAAATGATGTGATTCAAAGAGATTCAGAAGTTGACTCATCAGGAATAGATGCTTCAAATAATTCTTATGTGTCTTCAAGTTTTGAGGAGGAAAGTACATCCAATCCCTTGTTAAAGTTTTCTGCTTGA 2214 0.4042 MMSSRKGFCFSRLKLLLLIVTVAAAADHNRTCTPSACGKVTTITHPFRLRGDPASCGDRRYELSCENNITLLYLFPGKTYHVEAINYNNFTIRLVDPAISENDCSTLPRYSLSLTNFSTFGDDYYYQRVAEFGTGKYESLQERVSLNGSTPEENSVRMFEHVVFLNCTDPVRDDPRYVNTAPCINEGGNNVYAVLGDLAVVELRDDCRVKMIAASSFLVPPRLWQDSVFIEENLAYSEIHKKLSYGFELSWMYGFAREDKCGIKDFCLFNEITQNITCGDPDIPVCDYTSLLNYKCGNVSKLQIIAQDFAYGILKGLCKVVDMDSGERFSKKDVIPVVKVGLFMGLFLMSYIILKYSIGVMFFFALLIYTFRRRHISIYENIEDFLQGNTLMPIRYSYKEIKKMTKGFKEKLGEGGFGAVYKGKLRSGPFVAIKILGKAKANGQEFISEVATIGRIHHANVVRLIGFCVEGSKRALIYEFMPNGSLDKYIFSKEESVSLTSQKMFEISLGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEIASQRRNLNPHAEHSSQLYFPFWIYDRLAVEENDEIEMETFMHEERSELAKKMFIIALWCIQLKPSDRPSMNKVVEMLEGDVASIEMPPKPSYYPNDVIQRDSEVDSSGIDASNNSYVSSSFEEESTSNPLLKFSA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03850 737 Gene3D Phosphorylase Kinase; domain 1 383 480 - -
Aip06g03850 737 SMART serkin_6 406 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03850 737 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 15 708 - -
Aip06g03850 737 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Aip06g03850 737 CDD STKc_IRAK 412 681 - -
Aip06g03850 737 ProSitePatterns Protein kinases ATP-binding region signature. 412 434 IPR017441 GO:0005524
Aip06g03850 737 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 708 IPR045874 GO:0004672
Aip06g03850 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Aip06g03850 737 Gene3D Transferase(Phosphotransferase) domain 1 481 688 - -
Aip06g03850 737 MobiDBLite consensus disorder prediction 705 737 - -
Aip06g03850 737 Pfam Protein kinase domain 409 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03850 737 ProSiteProfiles Protein kinase domain profile. 406 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03850 737 SUPERFAMILY Protein kinase-like (PK-like) 391 680 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03850 Aip-Chr6 136189019 136195251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03850 15 695 Receptor kinase-like Gene Family AT5G38260 33.862 8.62e-106 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03850 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03850 - - ahf:112697889 1077.77