Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03849 ATGCCCAAGGGGACACAATACTATGAATCAATTATTTTACCCATTATAGGTGCAGCTCTCCTGTTCTCAACACTGGCTGCCTTGTATTATATATATTGCTATTATAGAAACAAAGGGGAAGATCAACAAAGAGTTCAAACTTTTTTGAAGGACTACGAGGCATTAAACCCAACAAGATTCTCTTATGCTGATATTAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTGTCCAATCAAATTCTTGTTGCTGTCAAGATCCTCAATAACACAGACGGAGATGGGAAAGAATTCATAAATGAAGTGGGAACTATGGCCAAAATCCACCATGTCAACGTGGTTCGCTTGCTTGGATATTGTGCTGATGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTTCGTCCAGCGACAAAGAAAGCTTTGTCGGATGGAACAAGTTGCATCAGATTGCTCTCGGCATAGCTAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAGAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATGACAGTTTCACTCCAAAAATTTCAGACTTTGGTTTGGCTAAGTTATGCTCGAAAAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACCTTAGGATACATGGCGCCTGAAGTTTTCTCTAGAAATTTCGGCAATGTATCTTATAAATCCGACATCTACAGTTATGGGATGTTATTGCTTGAGATGGTTGGAGGAAGGAAAAATACAAATGCAAGTCAAGAAACATTTCAAGTTCTATATCCCAATTGGATACACAATTTGCTTGAAGGAGATGATACATATATTCCTATTGATGATGATGGAGATTTTAGAATTGCAAAGAAACTGGCAATAGTAGGACTATGGTGCATCCAGTGGCACCCGGTTCAGCGTCCGTCCATGAAAAGTGTAGTTCAAATGCTTGTTGAAGGAGAGGAAAGCAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGCAGCTGCGACTACTTCAAGTGCAATTATTCCAGCAAGACGTCTGAATTTGGAGTTGGAAGTAATCCCAGAAACAGACTAG 1149 0.3995 MPKGTQYYESIILPIIGAALLFSTLAALYYIYCYYRNKGEDQQRVQTFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIASSSDKESFVGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDDSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVQRPSMKSVVQMLVEGEESKLKVPPNPFESAAATTSSAIIPARRLNLELEVIPETD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03849 382 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 381 - -
Aip06g03849 382 Gene3D Phosphorylase Kinase; domain 1 42 144 - -
Aip06g03849 382 Pfam Protein tyrosine and serine/threonine kinase 72 339 IPR001245 GO:0004672|GO:0006468
Aip06g03849 382 ProSiteProfiles Protein kinase domain profile. 70 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03849 382 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Aip06g03849 382 Gene3D Transferase(Phosphotransferase) domain 1 145 352 - -
Aip06g03849 382 SUPERFAMILY Protein kinase-like (PK-like) 51 339 IPR011009 -
Aip06g03849 382 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 381 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03849 Aip-Chr6 136186970 136188292 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03849 32 353 Receptor kinase-like Gene Family AT1G66980 49.394 1.58e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03849 PK_Tyr_Ser-Thr 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03849 - - ahf:112805998 719.539