Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03848 ATGCCAACATTCTTACTGCTACTGTTGCTGAATTTGAATCTGGATATCGCAATTTGCCATGACGATCCCGTTCCATGCCCCGTGCGTCTCTACTGTTCAGAAAACAAAACCAATATTCTTGAGCTACCTGGCTTTCCATCCTCAGTAAAACTCCACGTCAGTCGCATTAATTACGCATCAAAAACTTTACAAGTATATGATCCCGAACACTGTTTTCCAGAACTCTTTCTCAGACTCAATTATTCATCATTTTATCCTTTCCGATCCATCAAACAATATAGTTTTGATGATCCTCTAAAGCCAGCAAACTGTACTTTCTTTAATTGTTCTATAGGTGTATCAGTAAACTTATTATTCAGACCCTACTACGAAGAACAAAATCAGTTATCTTGCCCGATTTATATTGCTTTAGATGACGATTATATCATCGAGTCTAACTTTATATTCTGCACAAAACTGGCTCGTCATGTCTTGCCAATTTCCGTATGTAATATATGGTCTAGTCCATTATACTTTGTATGGTCGACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAAGGGCATTGAACACTATAAATCCATTCTTTTACCCCTTCCAGGTGCAGCTCTCCTTGTGTCAATACTGGTTGCCTTGTATTATATATATGGCTATTATAGAAACAAAGGGGAAGATCAAGAAAGAGTTAAAACTTTTTTGAAGGATTACGAGGCATTAAACCCGACAAGATTCTCTTATGCTGATATCAAGAGAATCACAAAGCAGTTTAAGGACAAATTAGGTGAAGGAGCTCATGGAGCCGTCTACAAAGGTAAATTGTCCAATCAAATTCTCGTTGCCGTGAAGATCCTCAACAGCACAGACGATGATGGAAAAGAGTTCATAAATGAAGTGGGAACTATGGCCAAAATCCACCATGTCAATGTGGTCCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATTGCTCCCTCCAGCAACAACGAAACCTTTCTCGGATGGAACAAGATGCATCAGATTGCTATCGGCATAGCCAAAGGGATTGAATATCTTCATCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATCAAAGTTTCACTCCTAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAGAATCGAAGTACTGTATCCATGACTGCAGCAAGGGGAACCTTAGGGTACATGGCGCCTGAAGTTTTCTCCAGAAACTTCGGGAATGTATCTTATAAATCCGATATCTACAGTTATGGGATGCTATTGCTTGAGATGGTTGGAGGGAGAAAGAATACAAACATGAGTCAGGAAACATTTCAAGTTCTGTATCCGAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCTATCGATGACGATGGAGATTTTAAAATTGCAAAGAAACTGGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCACCGTCCCTCCATGAAAAGTGCAGCTCTCCTTGTGTCAATACTGGTTGCCTTGTATTATATATATGGCTATTATAGAAACAAAGGGGAAGATCAAGAAAGAGTTAAAACTTTTTTGAAGGATTACGAGGCATTAAACCCGACAAGATTCTCTTATGCTGATATCAAGAGAATCACAAAGCAGTTTAAGGACAAATTAGGTGAAGGAGCTCATGGAGCCGTCTACAAAGGTAAATTGTCCAATCAAATTCTCGTTGCCGTGAAGATCCTCAACAGCACAGACGATGATGGAAAAGAGTTCATAAATGAAGTGGGAACTATGGCCAAAATCCACCATGTCAATGTGGTCCGCTTGCTTGGCTACTGCGCCGACGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGACCTTCATTGCTCCCTCCAGCAACAACGAAACCTTTCTCGGATGGAACAAGATGCATCAGATTGCTATCGGCATAGCCAAAGGGATTGAATATCTTCATCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATCAAAGTTTCACTCCTAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAGAATCGAAGTACTGTATCCATGACTGCAGCAAGGGGAACCTTAGGGTACATGGCGCCTGAAGTTTTCTCCAGAAACTTCGGGAATGTATCTTATAAATCCGATATCTACAGTTATGGGATGCTATTGCTTGAGATGGTTGGAGGGAGAAAGAATACAAACATGAGTCAGGAAACATTTCAAGTTCTGTATCCGAATTGGATACACAATTTGCTTGAAGGAGATGACACATATATTCCTATCGATGACGATGGAGATTTTAAAATTGCAAAGAAACTGGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGCAGAGGAAGACAATTTGAAAGTGCCGCCGAATCCTTTTGAATCTGCAGCTGCAAGTAGTTCAAGTGCAATTATTCCAGTGAGATTCTTAAATGTGGAATTGGAAGTAATTCCAGAAACTGACTAG 2664 0.405 MPTFLLLLLLNLNLDIAICHDDPVPCPVRLYCSENKTNILELPGFPSSVKLHVSRINYASKTLQVYDPEHCFPELFLRLNYSSFYPFRSIKQYSFDDPLKPANCTFFNCSIGVSVNLLFRPYYEEQNQLSCPIYIALDDDYIIESNFIFCTKLARHVLPISVCNIWSSPLYFVWSTETFKSGCFVACNVSNKGIEHYKSILLPLPGAALLVSILVALYYIYGYYRNKGEDQERVKTFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNSTDDDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIAPSSNNETFLGWNKMHQIAIGIAKGIEYLHQGCDQRILHFDINPYNVLLDQSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFKIAKKLAIVGLWCIQWHPVHRPSMKSAALLVSILVALYYIYGYYRNKGEDQERVKTFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNSTDDDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQTFIAPSSNNETFLGWNKMHQIAIGIAKGIEYLHQGCDQRILHFDINPYNVLLDQSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFKIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEAEEDNLKVPPNPFESAAASSSSAIIPVRFLNVELEVIPETD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03848 887 SUPERFAMILY Protein kinase-like (PK-like) 239 524 IPR011009 -
Aip06g03848 887 Pfam Protein tyrosine and serine/threonine kinase 578 845 IPR001245 GO:0004672|GO:0006468
Aip06g03848 887 Pfam Protein tyrosine and serine/threonine kinase 261 468 IPR001245 GO:0004672|GO:0006468
Aip06g03848 887 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 525 886 - -
Aip06g03848 887 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 524 - -
Aip06g03848 887 SUPERFAMILY Protein kinase-like (PK-like) 556 846 IPR011009 -
Aip06g03848 887 ProSiteProfiles Protein kinase domain profile. 576 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03848 887 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Aip06g03848 887 ProSiteProfiles Protein kinase domain profile. 259 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03848 887 PANTHER RUST RESISTANCE KINASE LR10-RELATED 525 886 IPR045874 GO:0004672
Aip06g03848 887 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 524 IPR045874 GO:0004672
Aip06g03848 887 Gene3D Phosphorylase Kinase; domain 1 549 650 - -
Aip06g03848 887 Gene3D Phosphorylase Kinase; domain 1 232 333 - -
Aip06g03848 887 Gene3D Transferase(Phosphotransferase) domain 1 651 857 - -
Aip06g03848 887 Gene3D Transferase(Phosphotransferase) domain 1 334 533 - -
Aip06g03848 887 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03848 Aip-Chr6 136173835 136177009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03848 566 858 Receptor kinase-like Gene Family AT1G66980 49.333 6.74e-93 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03848 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03848 - - adu:110273083 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03848 06 136173835 136177009 Aip06g03848 06 136173835 136177009 ECH