Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03846 ATGACAGCAGGTTTTAAGGAAAAGTTGGGAGAAGGAGGATTCGGCTCAGTCTACAAAGGAAAGCTAATAAGTGGACCCTTCGTAGCCATAAAAATGTTGGGTAAAGCGAAAGGAAACGGCCAAGAATTTATCAATGAAGTTGCTACAATTGGTAGGATACATCATGCGAATGTGGTGAAGTTGGTTGGCTTTTGCGTCGAAGAATCAAAACGTGCTCTTGTATATGAATTCATGCCGAAGGGTTCTCTCGACAAGTATATTTTTTCCAAAGAGAATAGTATATCATTAACATATCAGAAGATGTTTGAGATATCTCTTGGAGTGGCTCGCGGTATAGCTTATCTACATGAAGGTTGTGACATGCAGATTTTGCATTTTGATATCAAGCCTCATAATATCCTTCTTGATGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTCGCAAAACTTTATCCTCTTGATAATAGTATTGTAACTTTGACTGCCGCAAGAGGAACTATTGGCTACATGGCCCCAGAATTGTTCTACCAAAATATTGGAGCAGTATCTTATAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATGGCGAGTCAAAGAAAAAATTTGAATCCGCATGCAGAACATTCAAGTCAACTTTATTTTCCATTTTGGATTTATAATCACTTAGCTGCTGAGAGTCAAGAGATAGAGATGAAAACTTTTAATCATGAAGAAAGGAGTGAACTAACAAAAAAGATGTTTATGACTGCACTATGGTGTATACAATTGAAACCATGTGATCGTCCCTCAATGAATGAAGTAGTGAAAATGCTAGAAGGAGATGTCGCAACCATTAAAATGCCTCCAAAACCTTCATTTTATCCAAATGACGTGATTCAAAGAGATTCCGAGATTTACTCCGGAGTAAATGATTCAAATAATTCTTATGCGTCTTCAAGTTTTGAGGAGGAAAGTACAACCAACCCTTTGTTAAAGTTTTCTGGTTGA 999 0.3734 MTAGFKEKLGEGGFGSVYKGKLISGPFVAIKMLGKAKGNGQEFINEVATIGRIHHANVVKLVGFCVEESKRALVYEFMPKGSLDKYIFSKENSISLTYQKMFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEMASQRKNLNPHAEHSSQLYFPFWIYNHLAAESQEIEMKTFNHEERSELTKKMFMTALWCIQLKPCDRPSMNEVVKMLEGDVATIKMPPKPSFYPNDVIQRDSEIYSGVNDSNNSYASSSFEEESTTNPLLKFSG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03846 332 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 304 - -
Aip06g03846 332 ProSiteProfiles Protein kinase domain profile. 3 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03846 332 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Aip06g03846 332 MobiDBLite consensus disorder prediction 311 332 - -
Aip06g03846 332 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 304 IPR045874 GO:0004672
Aip06g03846 332 SUPERFAMILY Protein kinase-like (PK-like) 6 276 IPR011009 -
Aip06g03846 332 Pfam Protein kinase domain 6 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03846 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aip06g03846 332 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03846 332 PIRSF TyrPK_CSF1-R 66 331 - -
Aip06g03846 332 PIRSF TyrPK_CSF1-R 9 87 - -
Aip06g03846 332 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Aip06g03846 332 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03846 Aip-Chr6 136163464 136164462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03846 1 300 Receptor kinase-like Gene Family AT1G66910 48.026 1.71e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03846 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03846 - - ahf:112697889 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03846 06 136163464 136164462 Aip06g03846 06 136163464 136164462 ECH