Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03845 ATGGCAGCATTATTATTGATGCTGCTGCTGAATTTGAATCCGGACATGGGAATTTACCATGATGATCCCGTTCCATGTCCCGTGCGTCTCTACTGTTCAGAAGACAAAACCAATATCCTTGAGCTGCCTGCCTTTCCATCCTCAGTAAAACTCCCCGTCACAAGCATTAGCTACACATCAAACACTTTACAAGTATATGATCCCAAACACTGTTTTCCACAACTCTTTCTCACACTCAATTATTCATCATTTTATCCTTTCCAATCCATTAAACAATCACTTGATTTCGATAGTTTTTATGATCCTCTACACCCAACAAACTGTACTTTCTTTGATTGCTCTTCAAGCGTGCCACCAAACATCCTCAGCGGCTACTACGAGGAACAAGATCTGTTATCTTGCCCGATTCTTATTGCTTTAGATGACGACAACATCATCGAGTCCAACCTTGTATTCTGCACAAAATTGACTCGTCATGTCTTGCCAATTTCCTTATGTAACATAAAGTGGAATTGGGAACCATTATACTTGGTATGGTCGACAGAAACTTTCAAGAGTGGATGCTTTGTTGCTTGCAACGTATCCAACAAGGGCACTGAACACCATGAATCCATTCTTTTACCCCTTACAGGTGCAACTCTCCTTGTGCTAATACTGGGTGTCATGTATCATATATATTGCTATTATAGAAACAAAGGAGAAGATCAACAAAGAGTTGAAACTTTTTTGAAGGACTACAAAGCATTAAACCCAACAAGATTCTCTTATACTGATATCAAGAGAATTACAAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTAACTAATCAAATTCTGGTTGCCGTCAAGATTCTTAATAAAGCAGATGGAGATGGGACAGAATTCATAAATGAAGTGGGAACAATGGCCAAAATCCACCATGTCAATGTGGTTCGCTTGCTTGGCTACTGCGCCGAAGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTCTGTCAAGTGACAAGGAAACCTTCTTTGGATGGAACAAGATGCATCAGATTGCTGTGGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTAACCAAAGAATTCTGCATTTCGACATTAATCCTCGCAATGTCTTGTTAGATCAAAATTTCACTCCAAAAATTTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAAAATCGAAGCACTGTGTCCATGACAGCAGCAAGGGGAACCTTAGGATACATGGCGCCTGAAGTTTTCTCTAGAAACTTCGGGAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGTTGTTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCGAGTCAAGAAACATTTCAAGTTCTATATCCGAATTGGATACACAATTTGCTCGAAGGAGATGACACGTATATTCCAATTGACGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTGCACCGTCCCTCCATGAAAAGTGTAGTTCATATGCTTGAAGCAGAGGAAGATACGTTGAAAGTGCCTCCGAATCCTTTTGAATCTATAGCTGCGACTAGTTCAAGTGCAATTATTCCAGCAAAATTCTTGAATTTGGAATTGGAAGTAATTCCAGAAACAGACTAG 1728 0.4034 MAALLLMLLLNLNPDMGIYHDDPVPCPVRLYCSEDKTNILELPAFPSSVKLPVTSISYTSNTLQVYDPKHCFPQLFLTLNYSSFYPFQSIKQSLDFDSFYDPLHPTNCTFFDCSSSVPPNILSGYYEEQDLLSCPILIALDDDNIIESNLVFCTKLTRHVLPISLCNIKWNWEPLYLVWSTETFKSGCFVACNVSNKGTEHHESILLPLTGATLLVLILGVMYHIYCYYRNKGEDQQRVETFLKDYKALNPTRFSYTDIKRITKQFKDKLGEGAHGAVYKGKLTNQILVAVKILNKADGDGTEFINEVGTMAKIHHVNVVRLLGYCAEGSHRALVYHFFPNGNLQSFIALSSDKETFFGWNKMHQIAVGIAKGIEYLHQGCNQRILHFDINPRNVLLDQNFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVHMLEAEEDTLKVPPNPFESIAATSSSAIIPAKFLNLELEVIPETD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03845 575 SUPERFAMILY Protein kinase-like (PK-like) 244 534 IPR011009 -
Aip06g03845 575 Pfam Protein tyrosine and serine/threonine kinase 266 532 IPR001245 GO:0004672|GO:0006468
Aip06g03845 575 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 574 - -
Aip06g03845 575 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 574 IPR045874 GO:0004672
Aip06g03845 575 ProSiteProfiles Protein kinase domain profile. 264 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03845 575 Gene3D Transferase(Phosphotransferase) domain 1 339 544 - -
Aip06g03845 575 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Aip06g03845 575 Gene3D Phosphorylase Kinase; domain 1 237 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03845 Aip-Chr6 136158282 136160088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03845 209 546 Receptor kinase-like Gene Family AT1G66910 45.087 4.99e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03845 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03845 - - ahf:112805998 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03845 06 136158282 136160088 Aip06g03845 06 136158282 136160088 ECH