Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03844 ATGAGCAGATGGAAAAGCTTGTGGTGTTCACTACCACTCTTACACTTGCTCTTTCAAACTTGTTGCAATGGAGGAGCATGTAGACCTTCCTCTTGCGGCAAAATCACCAACATAAAACATCCTTTCCGGCTGAAGGATGATCCGGCAAGCTGTGGGGATTCCAGGTACGAGTTGTCTTGTGAGAATAACAGGACGCTGTTATATCTTTTCCCCGGTATAAGCTACCATGTGCAGGCAATAAACTACAATAACTTCACCATTCGGCTCGTAGATCCCGCCATCTCAGACTCAGGGGATGACTGCTCCACCCTTCCCCGATATTCTTTGTCCGTTAGAAATTTCAGTGACAGCTATAGCTACATGCATATCCCCAAATACAGTGAACCATATGGAGCCATTCAAGAACGAACTCATTATGTTGTAGTAAGAATGTTCGAGAACGTGATCTTTTTGAACTGCAGCTATCCGATCAGGGATGATCCACGATTCGTGGATGCTTCGCCTTGCGTTAAAGAAGGAGGCAATGTTTATGCTGTTCTTGGAGACATGGACGTGGGTGAATTAAGAGATGAGTGCCGTGTGAAGATGGTTGCTGCCTCATCCTTTCTTGTTCCACCGAGATCGTTGGTGGATTCATTCTTCATCTACCAAAACTTGTCATACGCTGAAATCCATAGAAAACTGAGTTACGGATTTCATCTTTCTTGGATGATCGGCGGTGCTTGTTCATCTGCCTGTGGCCAGCTCACTTCTTGCTTCTTCAACGAAACCTCTCCAAATCTCATCACTTGCCGAGCGCATCGCTGTTTCACTCCAATAACGTTCAATGAATGCGGATTTCGAAAAGTAGTAGGAAAAGATAGTGGCGGCGAGTCCTTCAATAAAGAGGATGTATTAGCTATCATTAAGGCAGGAGTATTCACGGGAGTGTTTATGGTGCCATTCATGGTGGTCAAATACGTATTGAGTCTCATACTTTTTTTCTTAGTGTTGATCTACTACACATGCCAAAGAAGACATGCATCAATTTATGAAAACATTGAGGAATTTTTACAAGGGAATGATCTCATTCCAATAAGGTATTCGTATAAAGAGATAAAGAAGATGACAGAAGATTTTAAGGAAAAGTTGGGAGAAGGAGGATTCGGCTCAGTGTATAAGGGAAAGCTACGAAGTGGACCTTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAAGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTGGTAAGGTTGATTGGATTTTGTGTAAAAGGTTCAAAACGCGCTCTTGTATATGAATTTATGCCGAATGGTTCTCTAGATAAGTTTATCTTCTCCAAAGTGGATAGTGTATCATTGACATACCAGAAACTTTTTGAAATATCTCTTGGTGTGGCTCGTGGTATAGCTTATCTGCACGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTGTCAGACTTTGGTCTTGCAAAGCTTAACCCTCTTGATAACAGTATTGTATCTTTGACAGCAGCAAGAGGAACAATTGGTTACATGGCTCCGGAATTGTTCTACAAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTCGAATCCAAAAGCAGAGCATTCAAGCCAATTTTACTTTCCATTTTGGATATACGATCAATTGGCTCAAAAAAGTGATGAGATAGAGTTGGAAATTTTGATGCATGAAGAAACGAGCGAACTAGCAAAAAAGATGTTTACAACTGCACTGTGGTGTATACAATTGAAGCCAAGTGATCGCCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGGGATGCTGCAAGTATTGAAATGCCTCCAAAGCCTTCCTATTATCCAAATGATATTATTCAGAGAGATTCTGAGATTAACTCAGGAGAAACTACTTCAAACAATTCTTCTGGCTCTTCAAGTTTTGAGGAGGAAATTGCAACTAACCCTCTGTTGAAGTTTTCTGAATGA 2103 0.4056 MSRWKSLWCSLPLLHLLFQTCCNGGACRPSSCGKITNIKHPFRLKDDPASCGDSRYELSCENNRTLLYLFPGISYHVQAINYNNFTIRLVDPAISDSGDDCSTLPRYSLSVRNFSDSYSYMHIPKYSEPYGAIQERTHYVVVRMFENVIFLNCSYPIRDDPRFVDASPCVKEGGNVYAVLGDMDVGELRDECRVKMVAASSFLVPPRSLVDSFFIYQNLSYAEIHRKLSYGFHLSWMIGGACSSACGQLTSCFFNETSPNLITCRAHRCFTPITFNECGFRKVVGKDSGGESFNKEDVLAIIKAGVFTGVFMVPFMVVKYVLSLILFFLVLIYYTCQRRHASIYENIEEFLQGNDLIPIRYSYKEIKKMTEDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKGNGQDFISEVATIGRIHHANVVRLIGFCVKGSKRALVYEFMPNGSLDKFIFSKVDSVSLTYQKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVSLTAARGTIGYMAPELFYKNIGAVSYKADVYSFGMLLMEMASQRRNSNPKAEHSSQFYFPFWIYDQLAQKSDEIELEILMHEETSELAKKMFTTALWCIQLKPSDRPSMNKVVEMLEGDAASIEMPPKPSYYPNDIIQRDSEINSGETTSNNSSGSSSFEEEIATNPLLKFSE 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03844 700 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Aip06g03844 700 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 671 IPR045874 GO:0004672
Aip06g03844 700 MobiDBLite consensus disorder prediction 664 690 - -
Aip06g03844 700 Gene3D Phosphorylase Kinase; domain 1 352 445 - -
Aip06g03844 700 Pfam Protein tyrosine and serine/threonine kinase 373 643 IPR001245 GO:0004672|GO:0006468
Aip06g03844 700 ProSiteProfiles Protein kinase domain profile. 371 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03844 700 SUPERFAMILY Protein kinase-like (PK-like) 358 644 IPR011009 -
Aip06g03844 700 MobiDBLite consensus disorder prediction 654 700 - -
Aip06g03844 700 CDD STKc_IRAK 377 645 - -
Aip06g03844 700 Gene3D Transferase(Phosphotransferase) domain 1 446 652 - -
Aip06g03844 700 SMART serkin_6 371 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03844 700 Pfam Wall-associated receptor kinase galacturonan-binding 27 91 IPR025287 GO:0030247
Aip06g03844 700 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 15 671 - -
Aip06g03844 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03844 Aip-Chr6 136120230 136157707 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03844 27 659 Receptor kinase-like Gene Family AT5G38260 35.725 1.12e-104 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03844 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03844 - - ahf:112697889 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03844 06 136120230 136157707 Aip06g03844 06 136120230 136157707 ECH