Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03842 ATGAAGTCATTTTCCACATCTCGCATTCCTCCGTTGGCAATGAAGATATCGACATTGTTTCTGCTGCTGCTTCTAAATCTCAATCTTGGGATTTGCCAGGATGACCATCCTCAAGTTCGATGTCCGGTACGTTTGTACTGTAAAGAAAATAAAACCAGTATTCTTGAGCTGCCTGCCTATCCCTCTTCAGTGAAACTCCCCGTCCGTAATATTAATTACGCATCAAATTCTTTAGAAATTTATGATCCCAAATACTGCCTTACTGAACTCTTTCTCAAACTCAATTACTCATCATTTTATCCTTTCCGATCCATTAGATATGGTTTCGACGATAGCGAATTTTCTCTTGATCACATGCGGACCAACGTTACTTTCTTTAACTGTTCTTCAAGAGGGCAATCATACCTGATAGAATTCGACGAAGCCGGACAAGATATTTCATCTTGTCCGATTCGTGTGGCTCATGACGACGACGATGCTATCGACTCAAAAACTGTGTTCTGCACAAAACTGGTTCGTCAAGTTATGCCATTGCCCGCAGATGTGCTACGGGATTATTTAATCCAATGGGTATGGAAGAGAAGTTTCCATAGTGGCGATGGATGCTTTCTCCCTTGCAGAGACTCTGTTTTGGAGAAGCCTAAATCAGGGAAGAAGTATGAAGCCATTATTTTACCCATTGCAGGTGCAGCTCTCCTTGTGTCAATACTCGCTGCCTTGTATTATATGCATCACTATTACACAAACAAAGGGGAAGATCAACAAAGAGTTCAAACTTTCTTGAAGGACTACGAGGCATTCAAACCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACTAAGAATTTTAAGGACAAGTTAGGCGCAGGAGCTCACGGAGCTGTCTACAAAGGTAAATTGTCCAATCAAATTCTTGTTGCTGTCAAGATTCTCAATAACACAGACGGAGATGGGAAAGAATTCATAAATGAAGTGGGAACTATGGCCAAAATCCACCATGTCAACGTGGTTCGCTTGCTTGGCTACTGCGCCGATGGATCTCACCGCGCTTTGGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTCATTGCTTCGTCCAGCGACAAGGAAAACTTTCTTGGATGGAACAAGTTGCATAAGATTGCTCTCGGCATAGCTAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAAAGAATTCTGCATTTTGATATTAATCCTTACAATGTCTTGTTAGATCAAAGTTTCACTCCAAAAATTTCAGATTTCGGTTTGGCTAAGTTATGCTCCAAGAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACGTTAGGGTACATGGCGCCAGAAGTTTTCTCCAGAAACTTCGGCAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGCTATTGCTTGAGATGGTTGGAGGAAGAAAGAATACAAACATGAGTCAGGAAACATTTCAAGTTCTGTATCCGAATTGGATACACAATTTGCTTGAAGGAGATGATACGTATATTCCTATCGACGACGATGGTGATTTTAGAATCGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATTCAATGGCACCCTGTGCACCGTCCGTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAGACAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGGCGCTGAGAGTAGTTCAAGTGCAAATATTCCAGCAAGATGCTTGAATTTGGAATTGGAAGTGATTCCAGAAACAGACTAG 1782 0.4158 MKSFSTSRIPPLAMKISTLFLLLLLNLNLGICQDDHPQVRCPVRLYCKENKTSILELPAYPSSVKLPVRNINYASNSLEIYDPKYCLTELFLKLNYSSFYPFRSIRYGFDDSEFSLDHMRTNVTFFNCSSRGQSYLIEFDEAGQDISSCPIRVAHDDDDAIDSKTVFCTKLVRQVMPLPADVLRDYLIQWVWKRSFHSGDGCFLPCRDSVLEKPKSGKKYEAIILPIAGAALLVSILAALYYMHHYYTNKGEDQQRVQTFLKDYEAFKPTRFSYADIKRITKNFKDKLGAGAHGAVYKGKLSNQILVAVKILNNTDGDGKEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSFIASSSDKENFLGWNKLHKIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDQSFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGEEDKLKVPPNPFESGAESSSSANIPARCLNLELEVIPETD 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03842 593 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 592 IPR045874 GO:0004672
Aip06g03842 593 Gene3D Transferase(Phosphotransferase) domain 1 357 563 - -
Aip06g03842 593 Gene3D Phosphorylase Kinase; domain 1 255 356 - -
Aip06g03842 593 SUPERFAMILY Protein kinase-like (PK-like) 263 552 IPR011009 -
Aip06g03842 593 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Aip06g03842 593 Pfam Protein tyrosine and serine/threonine kinase 284 550 IPR001245 GO:0004672|GO:0006468
Aip06g03842 593 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 592 - -
Aip06g03842 593 ProSiteProfiles Protein kinase domain profile. 282 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03842 Aip-Chr6 136101236 136103017 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03842 222 564 Receptor kinase-like Gene Family AT1G66910 45.014 2.42e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03842 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03842 - - adu:110273083 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03842 06 136101236 136103017 Aip06g03842 06 136101236 136103017 ECH