Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03840 ATGAAGTCATTTTCCACATCTCGCATTCCTCCGTTGGCAATGAAGATATCGACATTGTTTCTGCTGCTGCTTCTAAATCTCAATCTTGGGATTTGCCAGGATGACCATCCTCAAGTTCGATGTCCGGTACGTTTGTACTGTAAAGAAAATAAAACCAGTATTCTTGAGCTGCCTGCCTATCCCTCTTCAGTGAAACTCCCCGTCCGTAATATTAATTACGCATCAAATTCTTTAGAAATTTATGATCCCAAATACTGCCTTACTGAACTCTTTCTCAAACTCAATTACTCATCATTTTATCCTTTCCGATCCATTAGATATGGTTTCGACGATAGCGAATTTTCTCTTGATCACATGCGGACCAACGTTACTTTCTTTAACTGTTCTTCAAGAGGGCAATCATACCTGATAGAATTCGACGAAGCCGGACAAGATATTTCATCTTGTCCGATTCGTGTGGCTCATGACGACGACGATGCTATCGACTCAAAAACTGTGTTCTGCACAAAACTGGTTCGTCAAGTTATGCCATTGCCCGCAGATGTGCTACGGGATTATTTAATCCAATGGGTATGGAAGAGAAGTTTCCATAGTGGCGATGGATGCTTTCTCCCTTGCAGAGACTCTGTTTTGGAGAAGCCTAAATCAGGGAAGAAGTATGAAGCCATTATTTTACCCATTGCAGGTGCAGCTCTCCTTGTGTCAATACTCGCTGCCTTGTATTATATGCATCACTATTACACAAACAAAGGGGAAGATCAACAAAGAGTTCAAACTTTCTTGAAGGACTACGAGGCATTCAAACCAACCAGATTCTCTTATGCTGATATCAAGAGAATCACTAAGAATTTTAAGGACAAGTTAGGCGCAGGAGCTCACGGAGCTGTCTACAAAGATTTCGGTTTGGCTAAGTTATGCTCCAAGAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACGTTAGGGTACATGGCGCCAGAAGTTTTCTCCAGAAACTTCGGCAATGTATCTTACAAATCCGATATCTACAGTTATGGGATGCTATTGCTTGAGATGGTTGGAGGAAGAAAGAATACAAACATGAGTCAGGAAACATTTCAAGTTCTGTATCCGAATTGGATACACAATTTGCTTGAAGGAGATGATACGTATATTCCTATCGACGACGATGGTGATTTTAGAATCGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATTCAATGGCACCCTGTGCACCGTCCGTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAGACAAGTTGAAAGTGCCGCCAAATCCTTTTGAATCTGGCGCTGAGAGTAGTTCAAGTGCAAATATTCCAGCAAGATGCTTGAATTTGGAATTGGAAGTGATTCCAGAAACAGACTAG 1404 0.4174 MKSFSTSRIPPLAMKISTLFLLLLLNLNLGICQDDHPQVRCPVRLYCKENKTSILELPAYPSSVKLPVRNINYASNSLEIYDPKYCLTELFLKLNYSSFYPFRSIRYGFDDSEFSLDHMRTNVTFFNCSSRGQSYLIEFDEAGQDISSCPIRVAHDDDDAIDSKTVFCTKLVRQVMPLPADVLRDYLIQWVWKRSFHSGDGCFLPCRDSVLEKPKSGKKYEAIILPIAGAALLVSILAALYYMHHYYTNKGEDQQRVQTFLKDYEAFKPTRFSYADIKRITKNFKDKLGAGAHGAVYKDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGEEDKLKVPPNPFESGAESSSSANIPARCLNLELEVIPETD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03840 467 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 32 298 - -
Aip06g03840 467 PANTHER RUST RESISTANCE KINASE LR10-RELATED 299 466 IPR045874 GO:0004672
Aip06g03840 467 PANTHER RUST RESISTANCE KINASE LR10-RELATED 32 298 IPR045874 GO:0004672
Aip06g03840 467 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 299 466 - -
Aip06g03840 467 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Aip06g03840 467 SUPERFAMILY Protein kinase-like (PK-like) 299 437 IPR011009 -
Aip06g03840 467 Pfam Protein kinase domain 299 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03840 467 ProSiteProfiles Protein kinase domain profile. 85 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03840 Aip-Chr6 136098553 136100136 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03840 299 438 Receptor kinase-like Gene Family AT5G38260 50.000 5.04e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03840 Pkinase 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03840 - - aip:107647782 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03840 06 136098553 136100136 Aip06g03840 06 136098553 136100136 ECH