Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03838 ATGACAAGAGATTTTAAGGAAAAGCTGGGAGAAGGAGGATTCGGTTCAGTATATAAAGGAAAGCTACGAAGTGGACCTTTTGTAGCCATAAAAATGTTGGGGAAAGCCAAGGGTAATGGTCAAGATTTCATCAATGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTAGTAAGATTGATTGGATTTTGTGTAGAGGGTTCAAAACGCGCTCTTGTATACGAATTTATGCTGAATGGTTCTCTAGATAAATTTATCTTTTCCAAAGTGGATAGTGCATCATTGACTTACCAAGAATTTTTTGAAATATCTCTTGGAGTTGCTCGTGGTATAGCTTATCTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCTCACAATATTCTTCTTGACGATAATTTCATTCCTAAGGTGTCAGACTTTGGTCTTGCAAAGCTTAATCCTCTTGATAACAGTATTGTATCTTTGAAAACAGCAAGAGGAACCCTTGGTTACATGGCCCCAGAATTGTTCTACAAAAACATAGGAGCAGTTTCTTACAAGGCTGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAAACTCGAATCCAAACGCGGAGCATTCAAGCCAATTTTACTTTCCATTTTGGATATACGATCAATTGGCTCAAAAAAATGATGAGATAGAGTTGGAAATTTTGATGCATGAAGAAACAAGCGAACTAGCAAAAAAGATGTTCACAACTGCACTGTGGTGTATACAATTGAAGCCAAGTGATCGTCCTTCAATGAATAAAGTAGTGGAAATGTTAGAAGGGGATGCTGCAAGTATTGAAATGCCTCCAAAGCCCTCGTATTATCCAAATGATATTATTGAGAGAGATTCTGAGATTGACTTAGGAGAAACTACTTCAAATAATTCTTCCGGCTCTTCAGGTTTTGAGGAAGAAATTGCAACTAACCCTCTGTTGAAGTTTTCTGGATGA 999 0.3724 MTRDFKEKLGEGGFGSVYKGKLRSGPFVAIKMLGKAKGNGQDFINEVATIGRIHHANVVRLIGFCVEGSKRALVYEFMLNGSLDKFIFSKVDSASLTYQEFFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLNPLDNSIVSLKTARGTLGYMAPELFYKNIGAVSYKADVYSFGMLLMEMASQRRNSNPNAEHSSQFYFPFWIYDQLAQKNDEIELEILMHEETSELAKKMFTTALWCIQLKPSDRPSMNKVVEMLEGDAASIEMPPKPSYYPNDIIERDSEIDLGETTSNNSSGSSGFEEEIATNPLLKFSG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03838 332 Coils Coil 223 243 - -
Aip06g03838 332 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Aip06g03838 332 Pfam Protein kinase domain 5 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03838 332 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03838 332 SUPERFAMILY Protein kinase-like (PK-like) 5 276 IPR011009 -
Aip06g03838 332 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Aip06g03838 332 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 303 IPR045874 GO:0004672
Aip06g03838 332 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Aip06g03838 332 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 303 - -
Aip06g03838 332 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Aip06g03838 332 ProSiteProfiles Protein kinase domain profile. 3 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03838 332 MobiDBLite consensus disorder prediction 305 320 - -
Aip06g03838 332 PIRSF ILK 3 284 - -
Aip06g03838 332 MobiDBLite consensus disorder prediction 304 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03838 Aip-Chr6 136091882 136092880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03838 1 288 Receptor kinase-like Gene Family AT1G66910 52.414 5.38e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aip06g03838 Pkinase 5.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03838 - - ahf:112697889 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03838 06 136091882 136092880 Aip06g03838 06 136091882 136092880 ECH