Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03829 ATGACAGATCAAAATATTAAACCATTCTATCCTTTGGAACCTCCACTATCCAATGCAAAATTCAATTGGTCTGTCAATAGGGGTTACACGGTTTCTTCAAGGTTAGATAGATTCCTCTTCACCAAGGTTCTAGAAACAAAACCAGACATTCAACCGTTCAGGCTACTGGATAGGAAAGTAGAGCACACCGGCGGAGAGGAGGAGGCGACGACGGAGCAGTGGGGCGGAAAGGAGGAGGAAGCGAAGCAGAGAGGCGAAGAGAAGGCGGCAGTGGAGCAGAAAAGAGAGGCGACGCAGCAGAAGAGAAAAGAGGTCGCAGCGGAGAAGAAGCAGAAGCAGAGAGAGGACGCCGCAGCATATCAGAATCGATATTCAAGATCATCCACAATCCTAAATCACATCAAGGGAGAAGATGAATGTACTTACCTGCTCAATCAATTAAGGAACGGAATAGATCCTTCGAGACAGAGAACAGAGCGGGACAAGGAGCACGACGGTGGGGCTGATGCGGTGGAACAGAGGCAGCGCGGCGGGACAGTGGCTGCGCGATGGAGGAACGAGGCGAGACCAGTTGCAGCGGCGACGGTGGCTTCGAAGTTCAAACAGCGGCGGAGACGACCGGCTTCAAGCAACGCGGTGGCTACAACGGCGGCGGTGACAGGGCGGTGGCTGGACGGAGCAGGTGTGGGAGTTAGGGAGGAGCTCGAGTTGGAGAGGAAGTTAATAATGAAGAAGGAACCTGATCAAAAGGAAAAAATAATGAAGAAGGATCATGTTCCTTCCCCGAGTGTAGTACGGCCAAGATTTAAACCCATTACACGTCCAAACAACAAGCTTGATAGGTTGGAACAATGCCGTAAACTTTGGACAAAGATCAAGGCTCGGTTGCCATCCATTTGTGAGAAGGATGATATTTACCTCAAGCTTCAAAATAAAGTAAACAAGTACCAAAAGGGAAAAAAGTCTATCACCCAACTAGGTTTCGATGCTGCTATACTTATGCGGGATCATCCAGATCTTCTCAACGAGTTTGACCAATTGATTCCTGAGACTCTTCAAGATTCGTGCACGTTACTCTCCCAACACTTGGCAGCAGCAACATATTTGGAGAAAGTATCTATCGATTCTTTTTCTAATACTGAATCTTCTGAACCTGAAACTGTTACTCCCCTCCGCAACGCTGGAAACTCGCAATCGACAAGGTCGACTAAGCCTGGTGGATTTACAGTCCCCGAAAACCTTTGGAGAAAGATCGAGGATCGGTTTCTGGTGAATTACGATTCGCTCCAAAATAAAGTGCACGAGTACAAAGATGGAAGAAAATCTATCACCCAACTAAGTTCCGACGTTGCTACACTTTTGCGCGGCCATCCCGATCTTATTGATGAATTTCGCAAATGGATTCCTATCACTCGGAAAAAGGGCTCCAATAAAGTATATAGCTATACCAGTAGCGATTTTAGTGATAGTGATAGTGATAGTGATAGTGATAGTGATAGTGATAGTGATTCTGACATGGATTAA 1524 0.4685 MTDQNIKPFYPLEPPLSNAKFNWSVNRGYTVSSRLDRFLFTKVLETKPDIQPFRLLDRKVEHTGGEEEATTEQWGGKEEEAKQRGEEKAAVEQKREATQQKRKEVAAEKKQKQREDAAAYQNRYSRSSTILNHIKGEDECTYLLNQLRNGIDPSRQRTERDKEHDGGADAVEQRQRGGTVAARWRNEARPVAAATVASKFKQRRRRPASSNAVATTAAVTGRWLDGAGVGVREELELERKLIMKKEPDQKEKIMKKDHVPSPSVVRPRFKPITRPNNKLDRLEQCRKLWTKIKARLPSICEKDDIYLKLQNKVNKYQKGKKSITQLGFDAAILMRDHPDLLNEFDQLIPETLQDSCTLLSQHLAAATYLEKVSIDSFSNTESSEPETVTPLRNAGNSQSTRSTKPGGFTVPENLWRKIEDRFLVNYDSLQNKVHEYKDGRKSITQLSSDVATLLRGHPDLIDEFRKWIPITRKKGSNKVYSYTSSDFSDSDSDSDSDSDSDSDSDMD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03829 507 MobiDBLite consensus disorder prediction 379 408 - -
Aip06g03829 507 PANTHER SIN3B-RELATED 283 350 IPR039774 GO:0003714
Aip06g03829 507 PANTHER SIN3B-RELATED 417 492 IPR039774 GO:0003714
Aip06g03829 507 MobiDBLite consensus disorder prediction 151 179 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 248 263 - -
Aip06g03829 507 Gene3D Paired amphipathic helix 413 469 IPR036600 GO:0006355
Aip06g03829 507 Gene3D Paired amphipathic helix 288 349 IPR036600 GO:0006355
Aip06g03829 507 Coils Coil 88 123 - -
Aip06g03829 507 PANTHER BNAA07G28530D PROTEIN 283 350 - -
Aip06g03829 507 PANTHER BNAA07G28530D PROTEIN 417 492 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 248 272 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 490 507 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 153 171 - -
Aip06g03829 507 SUPERFAMILY PAH2 domain 290 350 IPR036600 GO:0006355
Aip06g03829 507 SUPERFAMILY PAH2 domain 425 469 IPR036600 GO:0006355
Aip06g03829 507 MobiDBLite consensus disorder prediction 479 507 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 61 119 - -
Aip06g03829 507 Pfam Paired amphipathic helix repeat 434 466 IPR003822 GO:0006355
Aip06g03829 507 MobiDBLite consensus disorder prediction 61 121 - -
Aip06g03829 507 MobiDBLite consensus disorder prediction 379 407 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip06g03829 PAH 4.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03829 - K11644 adu:107495749 197.978