Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03811 ATGGACCAAAGATATGCATATGCTGAATTCTCTCATCCATATATTCCATCCGGTATTGCCATGGTGGCAAAAGTAAAGCCAGATAGATCAAAAGAAACATGGATGTTCATGGAAGTTTTCACTAAAGAAATGTGGTTGTTAATGGCTGCAATGCACATGTTTGTATCATTTGTTATATGGTTGATTGAACGTGAACACAATTCAGAGCTTAAAGGGTTTGGAACCATGCTATGGTTTTCTGTCGCCACATTATTCTTTGTACATAGAGAACCTGTGAAAAGCAACTTGGCCAGAGCAGTGCTAGCACCATGGTTGTTTGCAATTCTGATAGTGACAGCATGTTTCACAGCAAGCCTGTCATCAATGATGACAGTGTCTCAACTTGAACCATCTGTGCCTGATATACAAACATTGCTAAGGACCAATGCAATAGTAGGTTGCAATAAGAACACATTCTTGGTTCATTACTTGGTTAAGGAACTGAAATTCAAGCCTGAGAATGTTAAGGGCTTTGAATCAATTAGTGATTTTCCAAGGGCTTTTGAGAAAAAAGAAATTGTAGCAGCTTTTACTATTGCACCTCATGCTCAAGTCTTTCTTGCTACACATTGTAAGGGATATATCAAAGCAGGACCTACCTTAAAGCTTGGTGGATTAGGCTTTGGCACAAATAGCACCTCTGATTCTAAAGCACGTATGTACCCGCCAAATCTCGAGCCTGAGGAAGACCAAACTAACCCAACAGCATTTCATCTCCGGCCACCGACACCACCCACCAAATCGGCGGACCCGATGAGATTGCAATTAACGAAGAATAGACTAGTCAACAAGCCACAACAACTATAA 846 0.4078 MDQRYAYAEFSHPYIPSGIAMVAKVKPDRSKETWMFMEVFTKEMWLLMAAMHMFVSFVIWLIEREHNSELKGFGTMLWFSVATLFFVHREPVKSNLARAVLAPWLFAILIVTACFTASLSSMMTVSQLEPSVPDIQTLLRTNAIVGCNKNTFLVHYLVKELKFKPENVKGFESISDFPRAFEKKEIVAAFTIAPHAQVFLATHCKGYIKAGPTLKLGGLGFGTNSTSDSKARMYPPNLEPEEDQTNPTAFHLRPPTPPTKSADPMRLQLTKNRLVNKPQQL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03811 281 Gene3D - 29 167 - -
Aip06g03811 281 PANTHER GLUTAMATE RECEPTOR 1 221 - -
Aip06g03811 281 Pfam Ligand-gated ion channel 42 150 IPR001320 GO:0015276|GO:0016020
Aip06g03811 281 MobiDBLite consensus disorder prediction 226 264 - -
Aip06g03811 281 SUPERFAMILY Periplasmic binding protein-like II 2 228 - -
Aip06g03811 281 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03811 Aip-Chr6 135833564 135837349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03811 3 222 Ion Channels AT2G29100 36.404 7.57e-42 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03811 - - aip:110263867 448.743