Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03782 ATGGAGGTACGCGATCTTCGGAGAGTGTCGGATGCAGGGGTCCCAATACTGAAGGGCATCAGTCTGGAAATCCCAAAGGGCGTCATAGTGGGAGTCATAGGCCCCAGTGGCAGCGGCAAGTCAACGCTCCTCAGGGCACTCAACCGCCTCTGGGAGCCTCCATCCGCCTCCGTCTTCCTCGACTCTCGAGACATCTGCCAGCTCGACGTGCTCTCCCTCCGGCGCAAAGTCGGCATGCTGTTCCAGCTGCCCGCCCTCTTCGAAGGCACTGTAGCCGACAACGTGAGGTACGGCCCCAGCCTCAGCGGGAAGAAGCTTTCAGATGTTGAGGTATGTAAGCTGTTGATGCTAGCGGACCTGGACGCTTCCTTCCTTCAGAAGTCGGCGGCGGAGTTGTCAGTGGGTCAAGCACAGAGGGTTGCGCTGGCCAGAACTCTTGCTAATTCCCCTGAGGTTTTGCTGCTTGATGAGCCAACGAGTGCTTTAGATCCTATTTCCACGGAGAATATAGAGGCTGCATTGTTGAAGCTCAACAAGAATAGTGGCATGACCATGATTATGGTGTCTCACAGCATCAAACAAATACAGAGGATTGCTGACGTCGTCTGCCTCCTCGTTGATGGTGAGATTGTTGAGATTCTAAACCCTAACCAACTCTCCCAAGCCAACCATCCCATGGCTCAGAGGTTTCTTCAACTCACCACTTAA 708 0.5424 MEVRDLRRVSDAGVPILKGISLEIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVFLDSRDICQLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPSLSGKKLSDVEVCKLLMLADLDASFLQKSAAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEAALLKLNKNSGMTMIMVSHSIKQIQRIADVVCLLVDGEIVEILNPNQLSQANHPMAQRFLQLTT 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03782 235 Gene3D - 2 234 IPR027417 -
Aip06g03782 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 222 IPR027417 -
Aip06g03782 235 ProSitePatterns ABC transporters family signature. 132 146 IPR017871 GO:0005524
Aip06g03782 235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 232 IPR003439 GO:0005524
Aip06g03782 235 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 2 234 IPR005670 GO:0005315|GO:0016020|GO:0035435
Aip06g03782 235 SMART AAA_5 26 209 IPR003593 -
Aip06g03782 235 CDD ABC_PstB_phosphate_transporter 1 219 IPR005670 GO:0005315|GO:0016020|GO:0035435
Aip06g03782 235 Pfam ABC transporter 17 160 IPR003439 GO:0005524
Aip06g03782 235 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 2 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03782 Aip-Chr6 135575359 135576688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03782 5 233 Calmodulin-binding Proteins AT2G36910 31.535 5.96e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03782 K02068 - gmx:100791365 379.407