Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03761 ATGAGGAATTTGGAGAGGAGAGAAACAAAGTATATGCGGCTTCAGAGATGTAAAGTTGGAGTTGATGATTTTGAGCAATTAACAGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGGCTCCGTGAAGAAGTTGAAGAAGTTGAACATGTTCGATCAGAGAGGAACTTACTGGCAGAGGTTGACAGTAGATGCATAGTAAAACTCCATTACTTGTTCCAAGATGCAGATTTCTTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTGATGGATGTTGCTCGTTTCTGCATTGCTGAAAGAATTCTCACTATTCACTCAATGCATCAGTACAACTACGTCCACAGGGACATAAAACCAAATAACCTGATATTGGATAAAAATGGCCATTTGAAGCTTTTGGACTTTGGATTATGTAACCCTCTTGATGATAAGTATTCAAGTATATTGGAAAATGAAGATTTTACCAGTCAAGAATCAACTAGTGAAACTGATGGATACTCTGGGTCCCCTTGGTTGATGCCTAAAGGAACAATAAATACAGCAGTGGAAACGTGTGCTATGATCTTGGGCACCAGATTCTTGTTCAAGTTCTCTGTAATAACTCATACTCTAATTAGAGAGCATCTCCGTGGCTACCCAGAAGATCCCGATCTGGATGTTGGCGATACGGGGAGGGATGAGCCACTCAAACAGGGACCTTGGGCAGCTGCTGCTCAAGGATCCATGGATGATCCGGGGTGCTGCGAACCAGCGAGTGGTGATGCCGTCGATGGAGGTCTGCGGGCGTCGTGCATGGAAGGGGTGACAATCCTGGGTGCAGCAGCGAGGACCAGGAGCCGAGGGAACCGGACGGAGATGGTGAGGTCTGCATCTCTTGTGGAAACTGCTTGGGGATCCTGGCACGAGTGGGTGGGAATCAGAGAGCTTCGGAACAAGACACAAGTATAG 963 0.4538 MRNLERRETKYMRLQRCKVGVDDFEQLTVIGKGAFGEVRLREEVEEVEHVRSERNLLAEVDSRCIVKLHYLFQDADFLYLIMEYLPGGDIMTLLMDVARFCIAERILTIHSMHQYNYVHRDIKPNNLILDKNGHLKLLDFGLCNPLDDKYSSILENEDFTSQESTSETDGYSGSPWLMPKGTINTAVETCAMILGTRFLFKFSVITHTLIREHLRGYPEDPDLDVGDTGRDEPLKQGPWAAAAQGSMDDPGCCEPASGDAVDGGLRASCMEGVTILGAAARTRSRGNRTEMVRSASLVETAWGSWHEWVGIRELRNKTQV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03761 320 Gene3D Transferase(Phosphotransferase) domain 1 89 149 - -
Aip06g03761 320 ProSiteProfiles Protein kinase domain profile. 24 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03761 320 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 46 166 - -
Aip06g03761 320 Pfam Protein kinase domain 43 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03761 320 SMART serkin_6 24 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03761 320 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 166 - -
Aip06g03761 320 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 40 - -
Aip06g03761 320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Aip06g03761 320 Gene3D Phosphorylase Kinase; domain 1 45 88 - -
Aip06g03761 320 SUPERFAMILY Protein kinase-like (PK-like) 8 149 IPR011009 -
Aip06g03761 320 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Aip06g03761 320 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03761 Aip-Chr6 135303592 135314859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03761 1 180 AGC Kinase Gene Family AT5G09890 65.550 7.24e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aip06g03761 Pkinase 1.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03761 K08790 - ahf:112697810 296.589