Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03733 ATGAAGGCACCTATTGAGATGGTTGTCCTTGATGAAGAGGGAGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATCTTCGAGGGCTTACTCGCTGAGGGCAACGTGTACGTGGTCACTAATTTTGGAGTTGCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGGATCCATTTCAAGAGGGACACGATTGTGCGTCCGGTACAAGATTCTTCAGTTCCATTGAACGGATTTAATTTTGTTCCGTTCAAAACAATTCAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGATGTGATAGGTCAGCTTGCTTCTAAGGGTAACTTGGTCGAATTCACACGGGACGGGAAGCCGTCAAGTTATATCACCATAGAACTTGATGATCTTGAGGGTGGACAGAAACTAAGGGTAACGTTGTGGCAGTCTTTTGCTTTTGAATTGCTCAAATATCTAGAGGAACACCCGTGTCTTACCTATGTGGTTATTCTCCAAATGGGCAAGATGAAATTTTATAGTGGGGTCATGGGTGTATCTAACACAAACTACAATTCAAAACTGTTTATCAATGTTGAGTTTCCAGCTGCCAGGGATTTCTTTGCGAGGGTGAACAAATTGGATCCTATTGACGGACAAGGCATAATGCCGCTGGTCTGTGGTCAACCTGTTTCAGATGAGGAGGATTTTTTGCGTCTGTCAGTTTACAAAACAATTGCAGAGATAAAGGAGCATAATCAGGATGCTGTATTTGTTACAGCCGGGACGATTAAAGAAGTTGAGACTGAATTTGGTTGGTGGTACAAAGGATACGTTGCTGGAGTTATGGCCGGCGTGGAGGGTGAGAGGAAATACATGAACGATGGTAAACTTATTAACATGATGGTCATTCATATTGAGAATGATGGTTTACGGCTTAATATTGTTGTTCTTGGAGAGATGGTGGACCGGATCAAGGATTTTCTAGCATCGGGCGATCAACAACTGCCAATAGTTATTTTTCAATTTGTAAGAGTAAAAAATGCTGGAGGTACGTGA 1047 0.4126 MKAPIEMVVLDEEGDTIQCTVKDIFVPIFEGLLAEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRDTIVRPVQDSSVPLNGFNFVPFKTIQSESKEDGYLVDVIGQLASKGNLVEFTRDGKPSSYITIELDDLEGGQKLRVTLWQSFAFELLKYLEEHPCLTYVVILQMGKMKFYSGVMGVSNTNYNSKLFINVEFPAARDFFARVNKLDPIDGQGIMPLVCGQPVSDEEDFLRLSVYKTIAEIKEHNQDAVFVTAGTIKEVETEFGWWYKGYVAGVMAGVEGERKYMNDGKLINMMVIHIENDGLRLNIVVLGEMVDRIKDFLASGDQQLPIVIFQFVRVKNAGGT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03733 348 SUPERFAMILY Nucleic acid-binding proteins 5 75 IPR012340 -
Aip06g03733 348 CDD RPA1_DBD_A_like 5 70 - -
Aip06g03733 348 PANTHER REPLICATION FACTOR A 1, RFA1 5 267 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aip06g03733 348 Gene3D - 77 211 IPR012340 -
Aip06g03733 348 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 5 267 - -
Aip06g03733 348 CDD RPA1_DBD_B_like 103 203 - -
Aip06g03733 348 Pfam Domain of unknown function DUF223 6 96 IPR003871 -
Aip06g03733 348 Gene3D - 2 76 IPR012340 -
Aip06g03733 348 SUPERFAMILY Nucleic acid-binding proteins 83 207 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03733 Aip-Chr6 134907278 134910579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03733 9 200 Core DNA Replication Machinery Family AT2G06510 30.049 7.60e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03733 - - aip:107647757 553.518