Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03729 ATGATTGTTAAAGGGCTTTCACATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAGCATTCTTGTGTTTCCTTCATTGGATAAAGAAATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATTGAAAACCAAAGAGGAGAAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCGAGAGGTACGCCATCATACTTGTCGCCGGAAGCATTTTCCGGTCATATTGATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGGGTAAGAGCCCTTTGCTTATTGAGGAGTTGAGGTACTTGGTTGAGCATCATGAACTATCACCCAAGAAGCCGCAGGGAATCGGTTTTTTCTGTCATGATTTTCTGGAAAAGTGTTTTATGAAGGATCCTAGCAAGAGACCTGATGGCTATGCCGTAGGATTTCTTGGGTCAGGCCGTCTTCTTCTCCTTGATGGCTTTGCCCAAAAGGAGTTGGAGTCGGGCGGTGTTAAAAAATAG 543 0.4438 MIVKGLSHIHRKGIVHCDLKPESILVFPSLDKEIANYQLKIADFGLLKTKEEKADVELWKSKPRGTPSYLSPEAFSGHIDAPMDIWALGCIVIEMLTGLPAWGKSPLLIEELRYLVEHHELSPKKPQGIGFFCHDFLEKCFMKDPSKRPDGYAVGFLGSGRLLLLDGFAQKELESGGVKK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03729 180 Gene3D Transferase(Phosphotransferase) domain 1 1 154 - -
Aip06g03729 180 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 148 - -
Aip06g03729 180 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 148 - -
Aip06g03729 180 SMART serkin_6 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03729 180 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03729 180 Pfam Protein kinase domain 2 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03729 180 SUPERFAMILY Protein kinase-like (PK-like) 2 150 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03729 Aip-Chr6 134872955 134873661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03729 2 148 MAP Kinase Kinase Kinase AT4G36950 39.073 3.58e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip06g03729 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03729 - - aip:107647754 311.227