Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03680 ATGGAGGTCCTTGCAAATTTCCTTTCCAATCCGTTGGCTTCAGGAGGAGACAGTGATGCTGCAGGATGGCCTTATTTGGCTTTTGATCTTGACCCCGCACTAGTAAATGCTGCTAAAAAAGCCGGCTTTCCAATTCACTATGGGGATGGATCACATCCTGCTGTTCTTCAGTCGGTCGGTATCTCTTCTCCAAAAGCTATTATGGTTATGTTCACCGGAAAGGAAAAGACAGCGGAAACTGTTCAGAGGCTACGGTTTACTTACCCTGCAATCCCAATCTATGCCAGAGCTAAAGATCTTGAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCCGTTTTGGAAAATGCAGAGATTAGCTTACAGCTGGGTTCTAAGCTTATGAAAGATAAGTCAAAGGACGTTGATCTGCCTACTAATCAAATAAGTAAAGGAGATTGGATATGTCCGGGATGCAGTGTTATGAATTTTTCCAAAAATATTCAGTGTCTAAAATGTAAGACAGCAGGGCCGAAGAGGATCAATCCAGATGAAGTTGAAATGAAAAAAGGAGATTTACTATTTTTCATATTGTTTTACTATTTTTGTTAA 597 0.407 MEVLANFLSNPLASGGDSDAAGWPYLAFDLDPALVNAAKKAGFPIHYGDGSHPAVLQSVGISSPKAIMVMFTGKEKTAETVQRLRFTYPAIPIYARAKDLEHLLDLKKAGATDAVLENAEISLQLGSKLMKDKSKDVDLPTNQISKGDWICPGCSVMNFSKNIQCLKCKTAGPKRINPDEVEMKKGDLLFFILFYYFC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03680 198 Gene3D - 2 143 - -
Aip06g03680 198 Pfam Zn-finger in Ran binding protein and others 145 173 IPR001876 -
Aip06g03680 198 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 132 - -
Aip06g03680 198 SUPERFAMILY Ran binding protein zinc finger-like 141 173 IPR036443 -
Aip06g03680 198 ProSiteProfiles Zinc finger RanBP2 type profile. 145 174 IPR001876 -
Aip06g03680 198 ProSiteProfiles RCK N-terminal domain profile. 2 123 IPR003148 GO:0006813
Aip06g03680 198 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 128 IPR036291 -
Aip06g03680 198 ProSitePatterns Zinc finger RanBP2-type signature. 149 168 IPR001876 -
Aip06g03680 198 SMART zf_4 147 171 IPR001876 -
Aip06g03680 198 Pfam TrkA-N domain 21 115 IPR003148 GO:0006813
Aip06g03680 198 Gene3D - 144 175 - -
Aip06g03680 198 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03680 Aip-Chr6 134331592 134334133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03680 2 130 Inorganic Solute Cotransporters AT4G04850 69.767 4.55e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03680 - - aip:107605588 258.455