Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03646 ATGAACTTTGATCATGGTGTCTCCAACACAAGCCTTCAACTTGGTCTTGCTCTTGGAATTGGCTTCCATCATCAAGAGAAGAATTGCATGAAGAAAAAGGAGGATGATCCATCAAGAAAATGCAATAATAAGGCATACCCATCTCTTACATTAGGACCAGCAATAATTGATGATGATAATCATAATAATCAAGCTTCAAAGATTATTGAAGACTCTAATTCTTCTCCAAGTGCAGTGTCATCGTTTTCCAACTCTTCTATCATAATCAAGAAGGAGAAAGATCAATTCTTGGTTGAAGAATTTGAGGTTGAGATTGATGAGAAGGCTCCATCATCATCAAGGGATGAAGATGGTAACAACACAAAAAGGAAGAAACTTAGGCTCTCAAAAGAACAATCTATAATCTTGGAGGAAAGCTTCAAGAACTATTCTAATCCCAATCCGCAAGAATTGGCAACACACTTGCATCTGCTGCCGAGACAAGTGGAGGTATGGTTCCAGAACAGGAGAGCCAGGACAAAGCTGAAACAAACAGAATCAGATTGTGAGTTCCTGAAGAAGTGCTACGAAAGTCTAACAGAAGAGAATAAGAGGCTCCAAAACGAGCTTCAAGAACTCAAATCAATGCAAACAACACCACCCTTTTCCATGCAAATTCCACCAACAACTCTTACTATATGCCCTTCTTGTGAGAAAATTTGGTCTAATAATAATAATAATAATAATAATAATGGGGAATTATTGCTTATAAGTTCAAAAACTCATCAACACCATAATCATTTCTACAAAAATAATGGATATCCATTATTCAAACACTCATCATCCGCAACATGCTAG 837 0.3692 MNFDHGVSNTSLQLGLALGIGFHHQEKNCMKKKEDDPSRKCNNKAYPSLTLGPAIIDDDNHNNQASKIIEDSNSSPSAVSSFSNSSIIIKKEKDQFLVEEFEVEIDEKAPSSSRDEDGNNTKRKKLRLSKEQSIILEESFKNYSNPNPQELATHLHLLPRQVEVWFQNRRARTKLKQTESDCEFLKKCYESLTEENKRLQNELQELKSMQTTPPFSMQIPPTTLTICPSCEKIWSNNNNNNNNNGELLLISSKTHQHHNHFYKNNGYPLFKHSSSATC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03646 278 Pfam Homeodomain 122 174 IPR001356 GO:0003677
Aip06g03646 278 PANTHER - 11 255 - -
Aip06g03646 278 MobiDBLite consensus disorder prediction 107 127 - -
Aip06g03646 278 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Aip06g03646 278 ProSiteProfiles 'Homeobox' domain profile. 119 176 IPR001356 GO:0003677
Aip06g03646 278 SUPERFAMILY Homeodomain-like 110 177 IPR009057 -
Aip06g03646 278 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 11 255 - -
Aip06g03646 278 CDD homeodomain 122 177 IPR001356 GO:0003677
Aip06g03646 278 Pfam Homeobox associated leucine zipper 176 209 IPR003106 GO:0006355|GO:0043565
Aip06g03646 278 Coils Coil 175 212 - -
Aip06g03646 278 Gene3D - 98 175 - -
Aip06g03646 278 SMART HOX_1 121 180 IPR001356 GO:0003677
Aip06g03646 278 SMART halz 176 219 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03646 Aip-Chr6 133884712 133886794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03646 88 233 Homeobox Transcription Factor Family AT2G22800 57.047 1.80e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aip06g03646 Homeodomain 9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03646 K09338 - gmx:100797650 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03646 06 133884712 133886794 Aip06g03646 06 133884712 133886794 ECH