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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Aip06g03606
ATGGGCCTGGCCCAAAAACAGCTGCCGCCTCCTTCTCCTCTTCCTCCTCCACCACGTTTGTGCGACAAGATGGATTCTGGGATTAAGCATGCTGTTGTTGTGAAAGTTATTGGCCGTACTGGATCCAGAGGTCAGGTGACTCAGGTTAGAGTGAAGTTCTTGGATGATCAGAACCGTCACATTATGAGGAATGTGAAGGGACCAGTTAGAGAAGGTGATGTTCTCACCCTGCTTGAATCTGAAAGAGAAGCAAGGAGTTTTTGGGATTCAGAAAACGATTTTATAAATAGCTTAAAACTAGGGTTTATCACACTACAGCGGAGCTGCAACAAGAGCGAGAGAGCTTCGAAGCTTAGTGCCGCCTCCTTCTCCTCAACCATGGCTGCTGCTGCTGCTGCTGCTCCTCCTCCTACCGAAGTTGATTCCACACAGCTCGACGTTAAGCTTTTCAACAGATGGAGCTTCGACGACGTCCAGGTGACTGATATCTCCCTGGCTGATTACATTGGAGTCGCGCCGTCGAAGCATGCGACGTACGTTCCCCACACCGCCGGTAGGTACTCGGTGAAGCGTTTCAGGAAGGCACAGTGCCCGATCGTAGAGAGGCTCACTAACTCCCTCATGATGCATGGAAGAAACAACGGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTTGCTTACCGACCAGAACCCTATCCAAGTCATCGTTGATGCCGTTATCAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCGCCTCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATTAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAAGGTTCATCGAATAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCTAATCGTTAA
1008
0.4851
MGLAQKQLPPPSPLPPPPRLCDKMDSGIKHAVVVKVIGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDVLTLLESEREARSFWDSENDFINSLKLGFITLQRSCNKSERASKLSAASFSSTMAAAAAAAPPPTEVDSTQLDVKLFNRWSFDDVQVTDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
335
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Aip06g03606
335
Hamap
30S ribosomal protein S28e [rps28e].
24
88
IPR000289
GO:0003735|GO:0005840|GO:0006412
Aip06g03606
335
Pfam
Ribosomal protein S28e
28
86
IPR000289
GO:0003735|GO:0005840|GO:0006412
Aip06g03606
335
Gene3D
Ribosomal protein S7 domain
128
335
IPR036823
-
Aip06g03606
335
TIGRFAM
uS7_euk_arch: ribosomal protein uS7
147
335
IPR005716
GO:0003735|GO:0006412|GO:0015935
Aip06g03606
335
CDD
S1_S28E
29
85
IPR000289
GO:0003735|GO:0005840|GO:0006412
Aip06g03606
335
Gene3D
-
22
87
IPR012340
-
Aip06g03606
335
PANTHER
RIBOSOMAL PROTEIN S7
131
335
IPR000235
GO:0006412
Aip06g03606
335
CDD
uS7_Eukaryote
148
335
IPR005716
GO:0003735|GO:0006412|GO:0015935
Aip06g03606
335
SUPERFAMILY
Nucleic acid-binding proteins
25
87
IPR012340
-
Aip06g03606
335
Pfam
Ribosomal protein S7p/S5e
189
335
IPR023798
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Aip06g03606
Aip-Chr6
133451946
133458223
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Aip06g03606
131
335
Cytoplasmic Ribosomal Protein Gene Family
AT2G37270
88.889
1.06e-133
377
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Aip06g03606
K02989
-
gmx:100815850
372.474
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Aip06g03606
06
133451946
133458223
Aip06g03606
06
133451946
133458223
ECH
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