Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03565 ATGGAATTCTCCTCTTCTTCTTTGCAAATCACTCCCATTGAAGAAGAATTTTATTTGGGTGATTGCTTCTCCATCATCTTCAATTACACCAAAAAATTGATCCAAATTATTGAAAGCTCAAACTCAACTCGTGAGGTTGAGTCTTGTTCTACTACAAGTACAGCCACGGAAGCAATCTTGGTTCCTTCAGACATCTTATGCAGTGTTACTCCACTCACAGAGCTCAGCAGAGAAGACACAATCTTGTTACATGAAATCTGTTCTTCACTAAGTGTGTCCCCTCAGCTATTAGACCGAATTTTACATGACATAGTCGAAACTGCAAGAAGGTGTGACTCCAACACGCGGGAGATTGTTGTGAACCTTAATGTTACCTCGTACAATGTTGTTCAAGATTCTGATGAGCAAGATGATGATGCTGAATGCGCCATTTGCTTGGAGAAGTTTGACGATGGTAATGAAGATTCAAGCGTACAAATTGTTCGTACAAATTGCTCGCATGTTTTTCATGATCGCTGCTTGCTCCACTGGCTCCGACGCTGTGCCAACTGTCAGTCGCCACATTCTTGCCCATTGTGCCGCAGCATCATATTTCCAACTTCAGAGATAGATAATGAATAG 621 0.4171 MEFSSSSLQITPIEEEFYLGDCFSIIFNYTKKLIQIIESSNSTREVESCSTTSTATEAILVPSDILCSVTPLTELSREDTILLHEICSSLSVSPQLLDRILHDIVETARRCDSNTREIVVNLNVTSYNVVQDSDEQDDDAECAICLEKFDDGNEDSSVQIVRTNCSHVFHDRCLLHWLRRCANCQSPHSCPLCRSIIFPTSEIDNE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03565 206 ProSiteProfiles Zinc finger RING-type profile. 142 194 IPR001841 -
Aip06g03565 206 SMART ring_2 142 193 IPR001841 -
Aip06g03565 206 PANTHER RING ZINC FINGER PROTEIN-RELATED 91 202 - -
Aip06g03565 206 Pfam Ring finger domain 141 194 IPR001841 -
Aip06g03565 206 SUPERFAMILY RING/U-box 129 200 - -
Aip06g03565 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 200 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03565 Aip-Chr6 133104171 133104791 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03565 142 198 C3H Transcription Factor Family AT4G12190 43.860 1.00e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03565 - K10664 adu:107495458 315.079