Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03546 ATGGTGTCTATGGAATTAGAATGGTGGTTATTTCCATTTATTCCAAGTGTACCTATGGTTTCATCAATATTATTCACCATGCTAGTAGGGTTTGTATGGTACCTTTATGGGCCCTATTGGAGGCTAAGAAGAGTTCCCGGCCCACCATCTCTTCCTCTTGTAGGACACCTTCCATTGCTTGCTAAGTATGGCCCTGATGTCTTCTCTGTCCTTGCAAAGCAATATGGCCCAATTTACAGATTTCATATGGGAAGACAGCCACTAATAATAATAGCAGAAGCAGAACTTTGTACTGAAGTTGGAATAAGAAAGTTCAAACAAATTTCAAATAGAAGCATTCCTTCTCCTATTTCTGCTTCCCCACTTCACCAAAAAGGTCTCTTCTTCACCAGGGGTCAACGTTGGTCAACCATGAGAAACACCATAATCTCAATGTACCAACCATCACACTTGGCCAGCTTAGTGCCAAGAATGCAATCATTCATAGAATCAGCAACACAAAATCTAGATCACATCACAAATACTAATGAAGACATAACATTCTCCAATCTCTCACTTAGGCTTGCAACCGATGTAATTGGTGATGCTGCATTTGGTGTCAACTTTGGACTCTCAAATCCCAATTATTCATCTAATTGTGATTTATCAATCAAGAACAATAATAATGTTAATGTTAACAAGGAAGTTTCTGATTTCATTAATCAACACATTTATTCCACTACACAACTGAAAATGGACCTATCCGGTTCATTTTCTATCATACTAGGATTAATTGTACCATTGCTTCAAGAACCGTTTCGGTGGATCTTGAAGCTGATTCCGGGTACCATGGATCAGAAAATAGAGAATACCAACAGGAAATTGAGCCGCCGACTCGACGAGATTGTGAAAAGGAGGATGGAAGAAAGTAACAGGAGTTGCAAGAATTTCTTGTCACTTATTTTGAATGCAAGGGAATCAAGAAATGTGTCTGAGGATGTGTTCACACATGATTATATTAGTGCTGTTACTTATGAACACTTGCTTGCAGGGTCAGCTACCACTTCTTTTACACTGTCCTCTGTTGTTTATTTGGTTGCTGGCCATCCTGAAGTTGAGAGCAAGTTGATTCAAGAGATCGATGACTTCGGTCCGCCTGATCGGATGCCGACTGCCCAAGATCTTCAAGATAGTTTTCCTTATCTTCATCAGGTTATTCAAGAGGCCATGAGGATTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAACTGAAGTAGAGATAGGAGGTTATCTCCTTCCAAAGGGAACATGGGTGTGGCTAGCACTTGGAGTTCTAGCAAAAGACCCAAAACAATTTCCAGAGCCAGAGAAGTTCAAACCAGAGAGATTTGACCCTAAATGTGATGAGATGAAACAAAGGCACCCTTATGCATTTATACCATTTGGAATTGGTCCTCGTGCCTGTATTGGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCTAATTCATTTGTATAG 1515 0.3914 MVSMELEWWLFPFIPSVPMVSSILFTMLVGFVWYLYGPYWRLRRVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIAEAELCTEVGIRKFKQISNRSIPSPISASPLHQKGLFFTRGQRWSTMRNTIISMYQPSHLASLVPRMQSFIESATQNLDHITNTNEDITFSNLSLRLATDVIGDAAFGVNFGLSNPNYSSNCDLSIKNNNNVNVNKEVSDFINQHIYSTTQLKMDLSGSFSIILGLIVPLLQEPFRWILKLIPGTMDQKIENTNRKLSRRLDEIVKRRMEESNRSCKNFLSLILNARESRNVSEDVFTHDYISAVTYEHLLAGSATTSFTLSSVVYLVAGHPEVESKLIQEIDDFGPPDRMPTAQDLQDSFPYLHQVIQEAMRIYTVSPLVARETSTEVEIGGYLLPKGTWVWLALGVLAKDPKQFPEPEKFKPERFDPKCDEMKQRHPYAFIPFGIGPRACIGKXXXXXXXXXXXXFSNSFV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03546 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Aip06g03546 504 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PANTHER THROMBOXANE-A SYNTHASE 20 487 - -
Aip06g03546 504 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 Gene3D Cytochrome P450 35 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 487 - -
Aip06g03546 504 Pfam Cytochrome P450 46 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip06g03546 504 SUPERFAMILY Cytochrome P450 39 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03546 Aip-Chr6 132900733 132906869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03546 83 486 Cytochrome P450 AT2G26170 70.297 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03546 K20771 - gmx:100805689 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03546 06 132900733 132906869 Aip07g03425 07 124033050 124036277 PCT