Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03536 ATGCACCAACTCTTGGCAATTAAAACATGCAACAACTTGTCCCTGATAGAGAATAGACCAAATTCGAAGGCTGTTGGACCCAATGGAGAGATCCTTAATGCAAAAGAAGCATTCCATGTGGCCGAAATCAGATCCGATTTCTTCAAGTTGCAACCTAAAGAAGGCCTTGCACTAGTGAATGGCACTGTTGTTGGTTCCGGACTAGCCTCAATTGTCCTATTTGAGGCCAATATCCTAGCTGTCTTGTCGGAGGTTCTTTCGGCCATATTCGCGGAGGTGATGCAGGGGAAGCCAGAGTTTACTGACCATTTGACACACAAATTGAAGCACCATCCTGGACAAATTGATGCTGCAGCCATAATGGAACACATTTTGGATGGTAGCTCATATGTCAAAGCCGCCTAG 405 0.4543 MHQLLAIKTCNNLSLIENRPNSKAVGPNGEILNAKEAFHVAEIRSDFFKLQPKEGLALVNGTVVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIDAAAIMEHILDGSSYVKAA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03536 134 PANTHER PHENYLALANINE AMMONIA-LYASE 14 134 - -
Aip06g03536 134 PANTHER HISTIDINE AMMONIA-LYASE 14 134 IPR001106 -
Aip06g03536 134 Gene3D Fumarase/aspartase (Central domain) 64 133 - -
Aip06g03536 134 SUPERFAMILY L-aspartase-like 19 133 IPR008948 GO:0003824
Aip06g03536 134 Pfam Aromatic amino acid lyase 28 131 IPR001106 -
Aip06g03536 134 Gene3D - 11 62 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03536 Aip-Chr6 132793291 132794411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03536 15 134 Monolignol Biosynthesis Gene Families AT3G10340 82.500 2.37e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03536 K10775 - gmx:100811101 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03536 06 132793291 132794411 Aip06g03536 06 132793291 132794411 ECH