Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03527 ATGAGCTTGAAGAAGAGCCCTCAAATTCATGAGAAAGAGAAAGGAGCATTATCCCCATTATCATCATCATCATCCAAGGCAAGTTCTTCAATAAGGGACAATAGTGGTAATAATAAGAATAATAATAAAAAGAAGTATGTAGAGCCACCAAGCCCTGCTTTACCTTCTGGTTGTTGCCGAGGATTCACCAATAATAATAATGTCAAGATCAAGAATAATGCTACTTCTACTACTAATAATAATGGATCCATATCGTCAACCTCACAACAAAATCACCAACAACTGCTTTACCAAAGACTCCAATCTAAGGTGGCAGATTTAGAAAAGGAAGTGCAAAAGCAAGCAGAACTAAGAGTAATGTACAGGAAAAGAATGGAAAGAACACAAGACTACTTGAGATATTGCCTTCAAATAGCACAAGACAATGGAATATTGGACCTTATTGTTAAACAACCTCCTCTCTCTCATGCTCTAAGCTCATCCTCCATTATTGCAAGCCCTCAAGTTCAAATCCCCACTACTACTACTACTACTCATCTTGCTCAGATCATAGATCAAGCCAAAATCAATGGATGGTACATTGATCCTATTGAGATTGAGTTGGAAGAGAAAATTGGGGAAGGAAGCACCGCAGACATATACAAGGGAAGATGGCGAGGATTTCAAGTGGCAGTGAAGTGCATATCGGCAGAGTTCTTCCGCACAAACCAAAACGGCGTCGTTTGCTTCGTTCAAGAGCTCGAAACCCTCTCCAAACAACGCCATAGATTTGTTCTTCAGCTAATGGGTGCGTGCTTGGACCCTCCCCAACACGCGTGGATTGTAACCGAATACTTAACCACCAATCTAAAAGAGTATCTACATGGCCCTGCCAATACAAGAAGCAAACACAGAGCGGTGCCACTCTCACCCTTTAGAGACAGGCTTCTCATGGCATTGGAGATTTCACAAGCTATGCAATATTTGCATCACCACAACCCTAAGATTATTCATCGTGATCTCAAACCGTCTAATATTTTTTTAGACGATGCCTTGCATGTTAGGGTTGCGGATTTCGGCCATGCTCGATTCTTAGGCGATCAGGAGATGGCTCTCACTGGAGAAACAGGAACATATGTGTACATGGCACCAGAGGTGATCCGATGTGAACCTTACAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTGAATGAGCTTCTAACTGGAAAACATCCATACATTGAGACAGAATATGGTCCCACCAAGATTGCAATGGAAGTTGTGGAGGGTAAGCTGAGGCCAATGCTTCCATGTGATGATGATGCTAACCTAATGGAAGAGCTAATTGACCTTATTAACCTTTGCTGGGATGCAAACCCATCAACAAGACCATCTTTTGCAGCTATCACACGTACCCTTGAAATTTATGTGAACAAGCTCTATCAAACTATATCAACTCCTTAA 1449 0.4134 MSLKKSPQIHEKEKGALSPLSSSSSKASSSIRDNSGNNKNNNKKKYVEPPSPALPSGCCRGFTNNNNVKIKNNATSTTNNNGSISSTSQQNHQQLLYQRLQSKVADLEKEVQKQAELRVMYRKRMERTQDYLRYCLQIAQDNGILDLIVKQPPLSHALSSSSIIASPQVQIPTTTTTTHLAQIIDQAKINGWYIDPIEIELEEKIGEGSTADIYKGRWRGFQVAVKCISAEFFRTNQNGVVCFVQELETLSKQRHRFVLQLMGACLDPPQHAWIVTEYLTTNLKEYLHGPANTRSKHRAVPLSPFRDRLLMALEISQAMQYLHHHNPKIIHRDLKPSNIFLDDALHVRVADFGHARFLGDQEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGKHPYIETEYGPTKIAMEVVEGKLRPMLPCDDDANLMEELIDLINLCWDANPSTRPSFAAITRTLEIYVNKLYQTISTP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03527 482 ProSitePatterns Protein kinases ATP-binding region signature. 205 226 IPR017441 GO:0005524
Aip06g03527 482 Pfam Protein kinase domain 200 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03527 482 SMART serkin_6 199 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03527 482 MobiDBLite consensus disorder prediction 1 90 - -
Aip06g03527 482 ProSiteProfiles Protein kinase domain profile. 199 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip06g03527 482 MobiDBLite consensus disorder prediction 58 90 - -
Aip06g03527 482 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 83 475 - -
Aip06g03527 482 CDD STKc_MAP3K-like 205 468 - -
Aip06g03527 482 SUPERFAMILY Protein kinase-like (PK-like) 184 469 IPR011009 -
Aip06g03527 482 PANTHER OS09G0443600 PROTEIN 83 475 - -
Aip06g03527 482 Coils Coil 90 117 - -
Aip06g03527 482 Gene3D Transferase(Phosphotransferase) domain 1 300 481 - -
Aip06g03527 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Aip06g03527 482 Gene3D Phosphorylase Kinase; domain 1 179 280 - -
Aip06g03527 482 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03527 Aip-Chr6 132548612 132554572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03527 169 468 MAP Kinase Kinase Kinase AT4G35780 37.542 5.94e-52 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Aip06g03527 Pkinase 2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03527 - - ahf:112757851 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03527 06 132548612 132554572 Aip06g03527 06 132548612 132554572 ECH